RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 VAV3Q9UKW4 847 aa18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 RSPH10B2B2RC85 870 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 H3BQV1 296 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 EML1O00423 815 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 SOX1O00570 391 aaPredicted RBP18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 ZNF862O60290 1169 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 PARNO95453 639 aaKnown RBP18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 PFKMP08237 780 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 RSPH10BP0C881 870 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 PPP2R5CQ13362 524 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 ZNF174Q15697 407 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 CALCRLQ16602 461 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 MCTP1Q6DN14 999 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 TAF2Q6P1X5 1199 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 OTOP2Q7RTS6 562 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 HERVK_113Q902F9 699 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 ZBTB10Q96DT7 871 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 FTOQ9C0B1 505 aaKnown RBP eCLIP18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 NRBP2Q9NSY0 501 aa18.27■□□□□ 0.52
SSSCA1-202ENST00000526433 EVPLQ92817 2033 aa18.27■□□□□ 0.51
SSSCA1-202ENST00000526433 NEMFO60524 1076 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 NBNO60934 754 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 CAND2O75155 1236 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 KLRC1P26715 233 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 MCM7P33993 719 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 UGCGQ16739 394 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 RASIP1Q5U651 963 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 RPAINQ86UA6 219 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 DNAJB3Q8WWF6 145 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 SNX21Q969T3 373 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 FAM167AQ96KS9 214 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 MTMR9Q96QG7 549 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 PCDHA12Q9UN75 941 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 PCDHA2Q9Y5H9 948 aa18.26■□□□□ 0.51
SSSCA1-202ENST00000526433 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 TANC1Q9C0D5 1861 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 ZBTB42B2RXF5 422 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 TXKP42681 527 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 TRAPPC10P48553 1259 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 MBTPS1Q14703 1052 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 TTC38Q5R3I4 469 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 MTHFD1LQ6UB35 978 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 RSPH3Q86UC2 560 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 LRCH3Q96II8 777 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 NOL7Q9UMY1 257 aaKnown RBP18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 COL1A2P08123 1366 aa18.25■□□□□ 0.51
SSSCA1-202ENST00000526433 CXCL10P02778 98 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 OATP04181 439 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 CTSHP09668 335 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 ACTN1P12814 892 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 TOB1P50616 345 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 PRKCEQ02156 737 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 SPIRE1Q08AE8 756 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 EPHA7Q15375 998 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 NCAPH2Q6IBW4 605 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 BANK1Q8NDB2 785 aa18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 FAM49AQ9H0Q0 323 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 MTIF3Q9H2K0 278 aaKnown RBP18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 TTC12Q9H892 705 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 CXXC1Q9P0U4 656 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-202ENST00000526433 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 SMIM35A0A1B0GVV1 85 aa18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 RBAK-RBAKDNI3L0D1 243 aa18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 STBD1O95210 358 aa18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 CHRNA1P02708 482 aa18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 P4HBP07237 508 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 PSMC5P62195 406 aa18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 ORC2Q13416 577 aaPredicted RBP18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 INTS4Q96HW7 963 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 CEP131Q9UPN4 1083 aa18.23■□□□□ 0.51
SSSCA1-202ENST00000526433 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 ZBBXA8MT70 800 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 RPLP2P05387 115 aaKnown RBP18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 QARSP47897 775 aaKnown RBP18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 NBR1Q14596 966 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 XKR3Q5GH77 459 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 NME8Q8N427 588 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 NIFKQ9BYG3 293 aaKnown RBP18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 OSBPL7Q9BZF2 842 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 RGL1Q9NZL6 768 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 SLC4A7Q9Y6M7 1214 aa18.22■□□□□ 0.51
SSSCA1-202ENST00000526433 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 LAMA2P24043 3122 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 MAGEB2O15479 319 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 DKC1O60832 514 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 C22orf31O95567 290 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 MRPS6P82932 125 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 MGAT3Q09327 533 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 IER5Q5VY09 327 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 CNKSR3Q6P9H4 555 aa18.21■□□□□ 0.51
SSSCA1-202ENST00000526433 KIAA0319LQ8IZA0 1049 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms