RNA–Protein interactions for RNA: ENST00000525960.1

ARHGEF12-204, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 4

Gene ARHGEF12, Length 468 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-204	ENST00000525960	HSPBP1	Q9NZL4	362 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	RBPJL	Q9UBG7	517 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ASH2L	Q9UBL3	628 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PCDHB4	Q9Y5E5	795 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	NUP155	O75694	1391 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ANKRD30B	Q9BXX2	1392 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ADAMTS13	Q76LX8	1427 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PRAG1	Q86YV5	1406 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	MYOM2	P54296	1465 aa		4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SCAF11	Q99590	1463 aa	Known RBP	4.88	□□□□□ -1.63
ARHGEF12-204	ENST00000525960		E9PSI1	815 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SMARCA5	O60264	1052 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	DGKI	O75912	1065 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ZNF28	P17035	718 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	CNR2	P34972	360 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ZC3H6	P61129	1189 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	CHRNA2	Q15822	529 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	RGL3	Q3MIN7	710 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	LBX2	Q6XYB7	198 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ZC3H18	Q86VM9	953 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	RBM12B	Q8IXT5	1001 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TTLL6	Q8N841	843 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PIP4K2C	Q8TBX8	421 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	DCAF4	Q8WV16	495 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	CLEC4D	Q8WXI8	215 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TOE1	Q96GM8	510 aa	Known RBP	4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SLC6A20	Q9NP91	592 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	USP40	Q9NVE5	1235 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	MYOT	Q9UBF9	498 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TELO2	Q9Y4R8	837 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	CPS1	P31327	1500 aa		4.87	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	DDX3X	O00571	662 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SLC27A2	O14975	620 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	HSPA2	P54652	639 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	MLLT6	P55198	1093 aa	Predicted RBP	4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	GJA9	P57773	515 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	NKX3-2	P78367	333 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	FAM26F	Q5R3K3	315 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	UBXN11	Q5T124	520 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	FOXB2	Q5VYV0	432 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	MCTP2	Q6DN12	878 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	STYK1	Q6J9G0	422 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	NSMF	Q6X4W1	530 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	OTOP3	Q7RTS5	596 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TXNDC5	Q8NBS9	432 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PHOSPHO1	Q8TCT1	267 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ZNF669	Q96BR6	464 aa	Predicted RBP	4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	MBD6	Q96DN6	1003 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ZSWIM3	Q96MP5	696 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	NGRN	Q9NPE2	291 aa	Known RBP	4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PTPRU	Q92729	1446 aa		4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.86	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TRAV20	A0A0B4J274	112 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	IQCA1L	A6NCM1	817 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	NKRF	O15226	690 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PDPK1	O15530	556 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	LTF	P02788	710 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	COL6A1	P12109	1028 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	COL6A2	P12110	1019 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PLP2	Q04941	152 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	RASGRF1	Q13972	1273 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	CYP4F22	Q6NT55	531 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PRRT2	Q7Z6L0	340 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TTLL11	Q8NHH1	800 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SH3RF2	Q8TEC5	729 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	YTHDC1	Q96MU7	727 aa	Known RBP	4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ZFYVE21	Q9BQ24	234 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	SPATA9	Q9BWV2	254 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	KRTAP4-5	Q9BYR2	181 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	WASHC2C	Q9Y4E1	1318 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TMEM2	Q9UHN6	1383 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PIK3C2G	O75747	1445 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	USP32	Q8NFA0	1604 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TOPAZ1	Q8N9V7	1692 aa		4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	RGPD8	O14715	1765 aa	Predicted RBP	4.85	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ADGRB2	O60241	1585 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	RIMS2	Q9UQ26	1411 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	KANK1	Q14678	1352 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TCRBV5S4A2T	A0A5A2	114 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	DIAPH1	O60610	1272 aa	Known RBP	4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	STK10	O94804	968 aa	Known RBP	4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	ITGB3	P05106	788 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	C6orf222	P0C671	652 aa	Predicted RBP	4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	GRK2	P25098	689 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	GRK3	P35626	688 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	GPR85	P60893	370 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	LRRC47	Q8N1G4	583 aa	Known RBP	4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	UHMK1	Q8TAS1	419 aa	Known RBP	4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	KRTAP3-1	Q9BYR8	98 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	CCDC113	Q9H0I3	377 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	PODXL2	Q9NZ53	605 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	JAG2	Q9Y219	1238 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	TRAF6	Q9Y4K3	522 aa		4.84	□□□□□ -1.63
ARHGEF12-204	ENST00000525960	FMN2	Q9NZ56	1722 aa		4.83	□□□□□ -1.64
ARHGEF12-204	ENST00000525960	MARF1	Q9Y4F3	1742 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms