RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TRPC6Q9Y210 931 aa23.6■■□□□ 1.37
TRAPPC9-215ENST00000524162 PCDHA2Q9Y5H9 948 aa23.6■■□□□ 1.37
TRAPPC9-215ENST00000524162 SAFBQ15424 915 aaKnown RBP eCLIP23.59■■□□□ 1.37
TRAPPC9-215ENST00000524162 LETM2Q2VYF4 491 aa23.59■■□□□ 1.37
TRAPPC9-215ENST00000524162 DIS3L2Q8IYB7 885 aaKnown RBP23.59■■□□□ 1.37
TRAPPC9-215ENST00000524162 DEFB123Q8N688 67 aa23.59■■□□□ 1.37
TRAPPC9-215ENST00000524162 BACH2Q9BYV9 841 aa23.59■■□□□ 1.37
TRAPPC9-215ENST00000524162 SQORQ9Y6N5 450 aa23.59■■□□□ 1.37
TRAPPC9-215ENST00000524162 SMIM35A0A1B0GVV1 85 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 NR5A1Q13285 461 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 RAB30Q15771 203 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 PLEKHG4Q58EX7 1191 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 ZNF697Q5TEC3 545 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 NME8Q8N427 588 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 FBXO18Q8NFZ0 1043 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 CEP131Q9UPN4 1083 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 SIP14410 1827 aa23.58■■□□□ 1.37
TRAPPC9-215ENST00000524162 CDH23Q9H251 3354 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 LOXHD1Q8IVV2 1947 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 BTBD18B2RXH4 712 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 ATP4AP20648 1035 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 DNAJB2P25686 324 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 PPP2R5CQ13362 524 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 SLFN12Q8IYM2 578 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 C8orf76Q96K31 380 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 FOXP1Q9H334 677 aaPredicted RBP23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 MTMR10Q9NXD2 777 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 KIF3AQ9Y496 699 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 SAMM50Q9Y512 469 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 PTPRSQ13332 1948 aa23.57■■□□□ 1.36
TRAPPC9-215ENST00000524162 COL6A3P12111 3177 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 SLC37A4O43826 429 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 CCNT1O60563 726 aaKnown RBP23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 ATP2A2P16615 1042 aaKnown RBP23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 ORC2Q13416 577 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 IKBKEQ14164 716 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 EARS2Q5JPH6 523 aaKnown RBP23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 ZNF710Q8N1W2 664 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 APBB2Q92870 758 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 PBX4Q9BYU1 374 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 UNC45AQ9H3U1 944 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 PCDHA11Q9Y5I1 949 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 CHD7Q9P2D1 2997 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 KDM3AQ9Y4C1 1321 aa23.56■■□□□ 1.36
TRAPPC9-215ENST00000524162 ZBTB42B2RXF5 422 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 DTNBO60941 627 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 MGAT3Q09327 533 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 MKRN4PQ13434 485 aaPredicted RBP23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 IER5Q5VY09 327 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 MTHFD1LQ6UB35 978 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 RUFY4Q6ZNE9 571 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 USP38Q8NB14 1042 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 FAM184AQ8NB25 1140 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 NRBP2Q9NSY0 501 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 GABBR1Q9UBS5 961 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 MSRAQ9UJ68 235 aa23.55■■□□□ 1.36
TRAPPC9-215ENST00000524162 ZBBXA8MT70 800 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 MAGEB2O15479 319 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 CHRNA1P02708 482 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 MIER3Q7Z3K6 550 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 SEPT8Q92599 483 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 HAS1Q92839 578 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 TIFAQ96CG3 184 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 TMX3Q96JJ7 454 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 SEMA6BQ9H3T3 888 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 VAV3Q9UKW4 847 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 TRANK1O15050 2925 aa23.54■■□□□ 1.36
TRAPPC9-215ENST00000524162 BAG4O95429 457 aaKnown RBP23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 KLRC1P26715 233 aa23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 KCNJ6P48051 423 aa23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 WDR5P61964 334 aaKnown RBP23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 IGBP1P78318 339 aa23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 CKAP2LQ8IYA6 745 aa23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 DNAJB3Q8WWF6 145 aa23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 UIMC1Q96RL1 719 aa23.53■■□□□ 1.36
TRAPPC9-215ENST00000524162 ZNF862O60290 1169 aa23.52■■□□□ 1.36
TRAPPC9-215ENST00000524162 DKC1O60832 514 aaKnown RBP eCLIP23.52■■□□□ 1.366e-7■■■■■ 30.5
TRAPPC9-215ENST00000524162 OATP04181 439 aa23.52■■□□□ 1.36
TRAPPC9-215ENST00000524162 MRPS6P82932 125 aaKnown RBP23.52■■□□□ 1.36
TRAPPC9-215ENST00000524162 DBF4BQ8NFT6 615 aa23.52■■□□□ 1.36
TRAPPC9-215ENST00000524162 TTYH1Q9H313 450 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC9-215ENST00000524162 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
TRAPPC9-215ENST00000524162 FAM205CA6NFA0 338 aa23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 CTSHP09668 335 aa23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 U2AF2P26368 475 aaKnown RBP eCLIP23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 TRAPPC10P48553 1259 aa23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 XKR3Q5GH77 459 aa23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 Q7L0L9 218 aa23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 HERC6Q8IVU3 1022 aa23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 NIFKQ9BYG3 293 aaKnown RBP23.51■■□□□ 1.35
TRAPPC9-215ENST00000524162 TTC3P53804 2025 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 GRXCR1A8MXD5 290 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 KIF28PB7ZC32 967 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 M0QZ92 97 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 CHMP2AO43633 222 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 CD2BP2O95400 341 aaKnown RBP23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 C22orf31O95567 290 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 PSMC5P62195 406 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 PRKCEQ02156 737 aa23.5■■□□□ 1.35
TRAPPC9-215ENST00000524162 SPIRE1Q08AE8 756 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms