RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 SLC4A7Q9Y6M7 1214 aa6.92□□□□□ -1.3
FAM49B-228ENST00000523993 COL4A4P53420 1690 aaPredicted RBP6.92□□□□□ -1.3
FAM49B-228ENST00000523993 COL4A6Q14031 1691 aa6.92□□□□□ -1.3
FAM49B-228ENST00000523993 TTC3P53804 2025 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 SFI1A8K8P3 1242 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 SPATA31C2B4DYI2 1134 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 BHMG1C9JSJ3 638 aaPredicted RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 SH2B2O14492 632 aaPredicted RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 MEIS2O14770 477 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 LGR5O75473 907 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 RECKO95980 971 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 HMGB1P09429 215 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 CALM1P0DP23 149 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 CALM2P0DP24 149 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 CALM3P0DP25 149 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 ACTN1P12814 892 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 UBA1P22314 1058 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 VAMP1P23763 118 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 CCND2P30279 289 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 HOXA13P31271 388 aaPredicted RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 KIF5BP33176 963 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 GNAQP50148 359 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 MRPS9P82933 396 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 KIAA0753Q2KHM9 967 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 TRIM71Q2Q1W2 868 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 HSDL1Q3SXM5 330 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 FAM47CQ5HY64 1035 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 PCNX4Q63HM2 1172 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 GDF6Q6KF10 455 aaPredicted RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 CHST3Q7LGC8 479 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 DHX37Q8IY37 1157 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 TPCN2Q8NHX9 752 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 IL31RAQ8NI17 732 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 DHX38Q92620 1227 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 SENP7Q9BQF6 1050 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 MKNK1Q9BUB5 465 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 EVA1BQ9NVM1 165 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 HDAC6Q9UBN7 1215 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 RBM19Q9Y4C8 960 aaKnown RBP6.91□□□□□ -1.3
FAM49B-228ENST00000523993 EVPLQ92817 2033 aa6.91□□□□□ -1.3
FAM49B-228ENST00000523993 ATG2AQ2TAZ0 1938 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 SLC27A2O14975 620 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 PRC1O43663 620 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 EFCAB14O75071 495 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 CAND2O75155 1236 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 NR1I2O75469 434 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 DXOO77932 396 aaKnown RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 CKBP12277 381 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 SELPP16109 830 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 ATP2A2P16615 1042 aaKnown RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 RCAN1P53805 252 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 PTPN5P54829 565 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 ADAM17P78536 824 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 COL9A3Q14050 684 aaPredicted RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 ADGRE1Q14246 886 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 NEDD9Q14511 834 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 GNPTABQ3T906 1256 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 CREB3L3Q68CJ9 461 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 CASC1Q6TDU7 716 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 METTL7BQ6UX53 244 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 CENPQQ7L2Z9 268 aaPredicted RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 ZBTB33Q86T24 672 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 SERINC5Q86VE9 423 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 HOMER1Q86YM7 354 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 SRBD1Q8N5C6 995 aaKnown RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 C7orf31Q8N865 590 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 USP38Q8NB14 1042 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 CTCFLQ8NI51 663 aaPredicted RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 RRP36Q96EU6 259 aaKnown RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 SPATA33Q96N06 139 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 ASB16Q96NS5 453 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 GAS2L1Q99501 681 aaPredicted RBP6.9□□□□□ -1.3
FAM49B-228ENST00000523993 USP26Q9BXU7 913 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 SLC28A3Q9HAS3 691 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 SEPT3Q9UH03 358 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 PCDHB3Q9Y5E6 796 aa6.9□□□□□ -1.3
FAM49B-228ENST00000523993 TCF20Q9UGU0 1960 aaKnown RBP6.89□□□□□ -1.31
FAM49B-228ENST00000523993 ABHD14A-ACY1A0A1B0GW23 586 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 MAFGO15525 162 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 FIBPO43427 364 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 NBNO60934 754 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 GGPS1O95749 300 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 ZNF286BP0CG31 522 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 MYCLP12524 364 aaPredicted RBP6.89□□□□□ -1.31
FAM49B-228ENST00000523993 IRX6P78412 446 aaPredicted RBP6.89□□□□□ -1.31
FAM49B-228ENST00000523993 EXOSC10Q01780 885 aaKnown RBP6.89□□□□□ -1.31
FAM49B-228ENST00000523993 MTMR3Q13615 1198 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 MSS51Q4VC12 460 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 RNF20Q5VTR2 975 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 CNKSR3Q6P9H4 555 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 LRRC8DQ7L1W4 858 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 DEFB128Q7Z7B8 93 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 RPAINQ86UA6 219 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 HERC6Q8IVU3 1022 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 FAM177A1Q8N128 213 aaPredicted RBP6.89□□□□□ -1.31
FAM49B-228ENST00000523993 FBXL16Q8N461 479 aa6.89□□□□□ -1.31
FAM49B-228ENST00000523993 FANCBQ8NB91 859 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms