RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 DNAJB3Q8WWF6 145 aa20.17■□□□□ 0.82
CLK4-211ENST00000522556 FTOQ9C0B1 505 aaKnown RBP eCLIP20.17■□□□□ 0.82
CLK4-211ENST00000522556 FAM49AQ9H0Q0 323 aaPredicted RBP20.17■□□□□ 0.82
CLK4-211ENST00000522556 MICAL3Q7RTP6 2002 aa20.17■□□□□ 0.82
CLK4-211ENST00000522556 TMEM150BA6NC51 233 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 ZBBXA8MT70 800 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 RSPH10B2B2RC85 870 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 CXCL10P02778 98 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 RSPH10BP0C881 870 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 GNAT1P11488 350 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 ATP2B1P20020 1258 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 TMCO2Q7Z6W1 182 aaPredicted RBP20.16■□□□□ 0.82
CLK4-211ENST00000522556 FAM184AQ8NB25 1140 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 TCEAL9Q9UHQ7 104 aa20.16■□□□□ 0.82
CLK4-211ENST00000522556 CHRNA1P02708 482 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 GCFC2P16383 781 aaKnown RBP20.15■□□□□ 0.82
CLK4-211ENST00000522556 RABGGTBP53611 331 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 PRKCEQ02156 737 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 MGAT3Q09327 533 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 TMEM62Q0P6H9 643 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 MIER3Q7Z3K6 550 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 CKAP2LQ8IYA6 745 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 FAM161BQ96MY7 647 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 TMEM60Q9H2L4 133 aa20.15■□□□□ 0.82
CLK4-211ENST00000522556 HBP1O60381 514 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 PFKMP08237 780 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 MYOGP15173 224 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 GJB2P29033 226 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 SMAD3P84022 425 aaKnown RBP20.14■□□□□ 0.81
CLK4-211ENST00000522556 SPIRE1Q08AE8 756 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 NBR1Q14596 966 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 MTHFD1LQ6UB35 978 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 BANK1Q8NDB2 785 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 SH2D3AQ9BRG2 576 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 PBX4Q9BYU1 374 aa20.14■□□□□ 0.81
CLK4-211ENST00000522556 TTYH1Q9H313 450 aaPredicted RBP20.14■□□□□ 0.81
CLK4-211ENST00000522556 WRAP73Q9P2S5 460 aaPredicted RBP20.14■□□□□ 0.81
CLK4-211ENST00000522556 RRN3P2A6NIE6 340 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 STBD1O95210 358 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 DNAJB2P25686 324 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 KLRC1P26715 233 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 SLC26A2P50443 739 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 JAK3P52333 1124 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 DEFB103AP81534 67 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 PPP2R5CQ13362 524 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 TAF2Q6P1X5 1199 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 DEFB123Q8N688 67 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 DBF4BQ8NFT6 615 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 YBX2Q9Y2T7 364 aaKnown RBP20.13■□□□□ 0.81
CLK4-211ENST00000522556 CDY2AQ9Y6F7 541 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 ARID2Q68CP9 1835 aa20.13■□□□□ 0.81
CLK4-211ENST00000522556 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.12■□□□□ 0.81
CLK4-211ENST00000522556 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.12■□□□□ 0.81
CLK4-211ENST00000522556 C22orf31O95567 290 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 OATP04181 439 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 GHRP10912 638 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 SFNP31947 248 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 MCM7P33993 719 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 MKRN4PQ13434 485 aaPredicted RBP20.12■□□□□ 0.81
CLK4-211ENST00000522556 SAFBQ15424 915 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLK4-211ENST00000522556 FAM26DQ5JW98 314 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 CNKSR3Q6P9H4 555 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 BBXQ8WY36 941 aaPredicted RBP20.12■□□□□ 0.81
CLK4-211ENST00000522556 FAM20AQ96MK3 541 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 PPP1R16BQ96T49 567 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 FOXP1Q9H334 677 aaPredicted RBP20.12■□□□□ 0.81
CLK4-211ENST00000522556 PCDHA2Q9Y5H9 948 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 SLC4A7Q9Y6M7 1214 aa20.12■□□□□ 0.81
CLK4-211ENST00000522556 COL1A2P08123 1366 aa20.11■□□□□ 0.81
CLK4-211ENST00000522556 CAND2O75155 1236 aa20.11■□□□□ 0.81
CLK4-211ENST00000522556 MCM2P49736 904 aa20.11■□□□□ 0.81
CLK4-211ENST00000522556 WDR5P61964 334 aaKnown RBP20.11■□□□□ 0.81
CLK4-211ENST00000522556 MRPS6P82932 125 aaKnown RBP20.11■□□□□ 0.81
CLK4-211ENST00000522556 PLEKHG4Q58EX7 1191 aa20.11■□□□□ 0.81
CLK4-211ENST00000522556 NCAPH2Q6IBW4 605 aa20.11■□□□□ 0.81
CLK4-211ENST00000522556 RPAINQ86UA6 219 aa20.11■□□□□ 0.81
CLK4-211ENST00000522556 TBX3O15119 743 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 NEMFO60524 1076 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 ARHGEF15O94989 841 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 ACTN1P12814 892 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 ATP2A2P16615 1042 aaKnown RBP20.1■□□□□ 0.81
CLK4-211ENST00000522556 CLCN3P51790 818 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 LPIN1Q14693 890 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 ZNF174Q15697 407 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 CALCRLQ16602 461 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 ZNF484Q5JVG2 852 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 PLA2G4FQ68DD2 849 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLK4-211ENST00000522556 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 KIAA0319LQ8IZA0 1049 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 RDM1Q8NG50 284 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 MTMR9Q96QG7 549 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 NAP1L4Q99733 375 aaKnown RBP20.1■□□□□ 0.81
CLK4-211ENST00000522556 CDHR5Q9HBB8 845 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 RGL1Q9NZL6 768 aa20.1■□□□□ 0.81
CLK4-211ENST00000522556 SEPT9Q9UHD8 586 aaPredicted RBP20.1■□□□□ 0.81
CLK4-211ENST00000522556 TOB1P50616 345 aaPredicted RBP20.09■□□□□ 0.81
CLK4-211ENST00000522556 CUL4AQ13619 759 aa20.09■□□□□ 0.81
CLK4-211ENST00000522556 GPR153Q6NV75 609 aa20.09■□□□□ 0.81
CLK4-211ENST00000522556 LRRC71Q8N4P6 559 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms