RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 TUBE1Q9UJT0 475 aa14.03□□□□□ -0.16
HDAC2-211ENST00000521233 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
HDAC2-211ENST00000521233 POTEMA6NI47 508 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 CAND2O75155 1236 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 BRD1O95696 1058 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 INSRRP14616 1297 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 RAG1P15918 1043 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 MUTP22033 750 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 TECP42680 631 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 PDIA5Q14554 519 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 SF3A1Q15459 793 aaKnown RBP14.02□□□□□ -0.17
HDAC2-211ENST00000521233 UGCGQ16739 394 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 TAF2Q6P1X5 1199 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 SERINC5Q86VE9 423 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 BANK1Q8NDB2 785 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 EIF2AK1Q9BQI3 630 aaKnown RBP14.02□□□□□ -0.17
HDAC2-211ENST00000521233 HIPK3Q9H422 1215 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 ZSWIM4Q9H7M6 989 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 SETD4Q9NVD3 440 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 LRWD1Q9UFC0 647 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 PPME1Q9Y570 386 aa14.02□□□□□ -0.17
HDAC2-211ENST00000521233 MORC2Q9Y6X9 1032 aaPredicted RBP14.02□□□□□ -0.17
HDAC2-211ENST00000521233 MKI67P46013 3256 aaKnown RBP14.02□□□□□ -0.17
HDAC2-211ENST00000521233 MBLAC1A4D2B0 266 aaPredicted RBP14.01□□□□□ -0.17
HDAC2-211ENST00000521233 ZNF862O60290 1169 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 LYPLA2O95372 231 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 NUCB2P80303 420 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 RBL2Q08999 1139 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 RSPH3Q86UC2 560 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 C4orf19Q8IY42 314 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 IGSF22Q8N9C0 903 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 DYDC2Q96IM9 177 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 AK8Q96MA6 479 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 CCDC43Q96MW1 224 aaKnown RBP14.01□□□□□ -0.17
HDAC2-211ENST00000521233 LBHD1Q9BQE6 289 aaPredicted RBP14.01□□□□□ -0.17
HDAC2-211ENST00000521233 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
HDAC2-211ENST00000521233 NOC4LQ9BVI4 516 aaKnown RBP14.01□□□□□ -0.17
HDAC2-211ENST00000521233 TUFT1Q9NNX1 390 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 SEPT9Q9UHD8 586 aaPredicted RBP14.01□□□□□ -0.17
HDAC2-211ENST00000521233 ZMYND8Q9ULU4 1186 aaPredicted RBP14.01□□□□□ -0.17
HDAC2-211ENST00000521233 KAT6AQ92794 2004 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 WDR81Q562E7 1941 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 LTBP2Q14767 1821 aa14.01□□□□□ -0.17
HDAC2-211ENST00000521233 TANC1Q9C0D5 1861 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 KDM3AQ9Y4C1 1321 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 TRIM43BA6NCK2 446 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 SLC26A4O43511 780 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 TIMP1P01033 207 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 CYP2C9P11712 490 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 ATP4AP20648 1035 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 NASPP49321 788 aaPredicted RBP14□□□□□ -0.17
HDAC2-211ENST00000521233 IGBP1P78318 339 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 ADAM17P78536 824 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 CYP4A11Q02928 519 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 PKP1Q13835 747 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
HDAC2-211ENST00000521233 KRT79Q5XKE5 535 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 EXOC8Q8IYI6 725 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 RETREG2Q8NC44 543 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 PPP1R13LQ8WUF5 828 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
HDAC2-211ENST00000521233 TRIM43Q96BQ3 446 aaPredicted RBP14□□□□□ -0.17
HDAC2-211ENST00000521233 HSD17B14Q9BPX1 270 aa14□□□□□ -0.17
HDAC2-211ENST00000521233 JPH2Q9BR39 696 aaPredicted RBP14□□□□□ -0.17
HDAC2-211ENST00000521233 TNRC18O15417 2968 aaPredicted RBP14□□□□□ -0.17
HDAC2-211ENST00000521233 DNAH12Q6ZR08 3092 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 VWA3AA6NCI4 1184 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 H0YGN5 161 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 MAGEB2O15479 319 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 TREHO43280 583 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 PARNO95453 639 aaKnown RBP13.99□□□□□ -0.17
HDAC2-211ENST00000521233 YEATS4O95619 227 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 SYN1P17600 705 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 RPA1P27694 616 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 LONP1P36776 959 aaKnown RBP13.99□□□□□ -0.17
HDAC2-211ENST00000521233 STK38Q15208 465 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 PRPF38BQ5VTL8 546 aaKnown RBP13.99□□□□□ -0.17
HDAC2-211ENST00000521233 FAM173BQ6P4H8 233 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 TPH2Q8IWU9 490 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 TMEM199Q8N511 208 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 KCTD17Q8N5Z5 321 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 SNX29Q8TEQ0 813 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 USP28Q96RU2 1077 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 NIFKQ9BYG3 293 aaKnown RBP13.99□□□□□ -0.17
HDAC2-211ENST00000521233 PPP1R12CQ9BZL4 782 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 RGL1Q9NZL6 768 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 CFAP45Q9UL16 551 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
HDAC2-211ENST00000521233 CLIC4Q9Y696 253 aa13.99□□□□□ -0.17
HDAC2-211ENST00000521233 SMIM35A0A1B0GVV1 85 aa13.98□□□□□ -0.17
HDAC2-211ENST00000521233 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
HDAC2-211ENST00000521233 SLITRK3O94933 977 aa13.98□□□□□ -0.17
HDAC2-211ENST00000521233 C22orf31O95567 290 aa13.98□□□□□ -0.17
HDAC2-211ENST00000521233 SELPP16109 830 aa13.98□□□□□ -0.17
HDAC2-211ENST00000521233 YWHABP31946 246 aaKnown RBP13.98□□□□□ -0.17
HDAC2-211ENST00000521233 RFC2P35250 354 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms