RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 STAMBPL1Q96FJ0 436 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 ZNF570Q96NI8 536 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 PLVAPQ9BX97 442 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CEP44Q9C0F1 390 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 OSGEPQ9NPF4 335 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 SEC31BQ9NQW1 1179 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 TUBGCP4Q9UGJ1 667 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 C2CD2Q9Y426 696 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CYP46A1Q9Y6A2 500 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 CNTNAP5Q8WYK1 1306 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 SBNO1A3KN83 1393 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 ADCY9O60503 1353 aa9.49□□□□□ -0.89
SHPRH-208ENST00000520752 ARHGEF40Q8TER5 1519 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 TM4SF5O14894 197 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 FSCN2O14926 492 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 VAMP4O75379 141 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 ZNF189O75820 626 aaPredicted RBP9.48□□□□□ -0.89
SHPRH-208ENST00000520752 KRT38O76015 456 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 CCT6AP40227 531 aaKnown RBP9.48□□□□□ -0.89
SHPRH-208ENST00000520752 INHBCP55103 352 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 SULT2A1Q06520 285 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 RESTQ13127 1097 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 KRT72Q14CN4 511 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 ME3Q16798 604 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 ZMYM1Q5SVZ6 1142 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 RASGRP2Q7LDG7 609 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 CCDC63Q8NA47 563 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 DYDC1Q8WWB3 177 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 CYFIP2Q96F07 1278 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 SCARF2Q96GP6 870 aaPredicted RBP9.48□□□□□ -0.89
SHPRH-208ENST00000520752 PLEKHF1Q96S99 279 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 MTA3Q9BTC8 594 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 MIS12Q9H081 205 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 NDST4Q9H3R1 872 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 HDAC6Q9UBN7 1215 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 BAIAP2L1Q9UHR4 511 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.48□□□□□ -0.89
SHPRH-208ENST00000520752 LRRC42Q9Y546 428 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 MYO3AQ8NEV4 1616 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 CD109Q6YHK3 1445 aa9.48□□□□□ -0.89
SHPRH-208ENST00000520752 GLI2P10070 1586 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 A0A0A0MRY4 1105 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 CCDC162PA2VCL2 907 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 GMNCA6NCL1 334 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 WDR46O15213 610 aaKnown RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 USO1O60763 962 aaKnown RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 SERPINC1P01008 464 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 PAEPP09466 180 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 PSMA5P28066 241 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 AMPD2Q01433 879 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 MYL5Q02045 173 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 SAFB2Q14151 953 aaKnown RBP eCLIP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 SKIDA1Q1XH10 827 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 MEI1Q5TIA1 1274 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 NAA16Q6N069 864 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 ZNF662Q6ZS27 426 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 ZNF365Q70YC5 407 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 SV2BQ7L1I2 683 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 ELOA2Q8IYF1 753 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 KIRREL3Q8IZU9 778 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 FAM177A1Q8N128 213 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 NSUN7Q8NE18 718 aaKnown RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 STKLD1Q8NE28 680 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 RUFY2Q8WXA3 655 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 NCSTNQ92542 709 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 HVCN1Q96D96 273 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 IQCDQ96DY2 449 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 NAF1Q96HR8 494 aaKnown RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 TMEM165Q9HC07 324 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 QPCTLQ9NXS2 382 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 GALNT8Q9NY28 637 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 BZW2Q9Y6E2 419 aaKnown RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 TROQ12816 1431 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-208ENST00000520752 ERVK-7P63135 1459 aa9.47□□□□□ -0.89
SHPRH-208ENST00000520752 INO80Q9ULG1 1556 aaPredicted RBP9.46□□□□□ -0.89
SHPRH-208ENST00000520752 MAST1Q9Y2H9 1570 aa9.46□□□□□ -0.89
SHPRH-208ENST00000520752 TARBP1Q13395 1621 aaKnown RBP9.46□□□□□ -0.89
SHPRH-208ENST00000520752 SPHKAPQ2M3C7 1700 aa9.46□□□□□ -0.89
SHPRH-208ENST00000520752 A0A1B0GVL5 298 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 LRRC10BA6NIK2 292 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 DNM1LO00429 736 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 N4BP3O15049 544 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 DEAF1O75398 565 aaPredicted RBP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 MBD4O95243 580 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 FAM200BP0CF97 657 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 U2AF1L5P0DN76 240 aaPredicted RBP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 SMARCA1P28370 1054 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 ARL4DP49703 201 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 HNRNPMP52272 730 aaKnown RBP eCLIP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 EPHB4P54760 987 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 RAC1P63000 192 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 U2AF1Q01081 240 aaKnown RBP eCLIP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 C19orf57Q0VDD7 668 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 PDCLQ13371 301 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 ITIH4Q14624 930 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms