RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 EP400NLQ6ZTU2 488 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 CCDC60Q8IWA6 550 aaPredicted RBP18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 FIBCD1Q8N539 461 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 HLA-CQ95604 372 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 TBC1D22BQ9NU19 505 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 PDRG1Q9NUG6 133 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 KAT6AQ92794 2004 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 HBP1O60381 514 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 LPXNO60711 386 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 PSAPP07602 524 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 CTNNB1P35222 781 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 SLC26A2P50443 739 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 TOB2Q14106 344 aaPredicted RBP18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 MTHFD1LQ6UB35 978 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 ZSWIM6Q9HCJ5 1215 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 COG5Q9UP83 839 aa18.3■□□□□ 0.52
IGHV3-42-201ENST00000520410 IGLV3-22A0A075B6J6 115 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 CYP3A4P08684 503 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 POU3F3P20264 500 aaPredicted RBP18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 KLRC1P26715 233 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 KRT76Q01546 638 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 NFX1Q12986 1120 aaKnown RBP18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 GPM6BQ13491 265 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 PTPROQ16827 1216 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 EPC2Q52LR7 807 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 ABHD15Q6UXT9 468 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 METTL13Q8N6R0 699 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 ATP8B4Q8TF62 1192 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 SAMD11Q96NU1 681 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 AGXT2Q9BYV1 514 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 LRFN2Q9ULH4 789 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 PCDHA2Q9Y5H9 948 aa18.29■□□□□ 0.52
IGHV3-42-201ENST00000520410 SIP14410 1827 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 DEXIO95424 95 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 BTG3Q14201 252 aaPredicted RBP18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 NTRK3Q16288 839 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 TMEM266Q2M3C6 531 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 TMEM192Q8IY95 271 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 NECAB3Q96P71 396 aaPredicted RBP18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 CELF4Q9BZC1 486 aaKnown RBP18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 LMCD1Q9NZU5 365 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 GABBR1Q9UBS5 961 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 EYSQ5T1H1 3165 aa18.28■□□□□ 0.52
IGHV3-42-201ENST00000520410 ADGRA3Q8IWK6 1321 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 MYO9BQ13459 2157 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 SMIM35A0A1B0GVV1 85 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 GAS7O60861 476 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 ATG7O95352 703 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 PAN2Q504Q3 1202 aaKnown RBP18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 ZNF484Q5JVG2 852 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 ZNF746Q6NUN9 644 aaPredicted RBP18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 SMAP1Q8IYB5 467 aaPredicted RBP18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 SP7Q8TDD2 431 aaPredicted RBP18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 TEKT3Q9BXF9 490 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 AGO3Q9H9G7 860 aaKnown RBP18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.52
IGHV3-42-201ENST00000520410 COL1A2P08123 1366 aa18.27■□□□□ 0.51
IGHV3-42-201ENST00000520410 UNC80Q8N2C7 3258 aa18.27■□□□□ 0.51
IGHV3-42-201ENST00000520410 ENPP3O14638 875 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 EPB41L2O43491 1005 aaKnown RBP18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 TBCKQ8TEA7 893 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 ZNF274Q96GC6 653 aaPredicted RBP18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 SCLT1Q96NL6 688 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 FTHL17Q9BXU8 183 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 C22orf23Q9BZE7 217 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 SH3GLB2Q9NR46 395 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 PADI3Q9ULW8 664 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 PCDHA4Q9UN74 947 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 PCDHA10Q9Y5I2 948 aa18.26■□□□□ 0.51
IGHV3-42-201ENST00000520410 IGKV6D-21A0A0A0MT36 114 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 DENND3A2RUS2 1198 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 WDR64B1ANS9 1081 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 DHX15O43143 795 aaKnown RBP18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 RPS6KA5O75582 802 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 CDKL5O76039 1030 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 STAG3L1P0CL83 205 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 TIGD5Q53EQ6 642 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 LRCH2Q5VUJ6 765 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 BLIDQ8IZY5 108 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 NME8Q8N427 588 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 BBXQ8WY36 941 aaPredicted RBP18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 MRPL38Q96DV4 380 aaKnown RBP18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 AKT3Q9Y243 479 aa18.25■□□□□ 0.51
IGHV3-42-201ENST00000520410 IGSF9BQ9UPX0 1349 aa18.24■□□□□ 0.51
IGHV3-42-201ENST00000520410 CHD9Q3L8U1 2897 aa18.24■□□□□ 0.51
IGHV3-42-201ENST00000520410 VTNP04004 478 aa18.24■□□□□ 0.51
IGHV3-42-201ENST00000520410 XBP1P17861 261 aa18.24■□□□□ 0.51
IGHV3-42-201ENST00000520410 KIZQ2M2Z5 673 aa18.24■□□□□ 0.51
IGHV3-42-201ENST00000520410 CRYGNQ8WXF5 182 aa18.24■□□□□ 0.51
IGHV3-42-201ENST00000520410 GJA10Q969M2 543 aa18.24■□□□□ 0.51
IGHV3-42-201ENST00000520410 FAM167AQ96KS9 214 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms