RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 ARHGEF35A5YM69 484 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 ZNF862O60290 1169 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 FARP2O94887 1054 aaPredicted RBP17.8■□□□□ 0.44
SNHG6-201ENST00000520348 KRT18P05783 430 aaKnown RBP17.8■□□□□ 0.44
SNHG6-201ENST00000520348 TPM3P06753 285 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 ADORA2AP29274 412 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 MAPK4P31152 587 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 YWHABP31946 246 aaKnown RBP17.8■□□□□ 0.44
SNHG6-201ENST00000520348 NEDD9Q14511 834 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 HERC4Q5GLZ8 1057 aaPredicted RBP17.8■□□□□ 0.44
SNHG6-201ENST00000520348 CCDC62Q6P9F0 684 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 MAMDC4Q6UXC1 1216 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 SFR1Q86XK3 245 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 GLIS3Q8NEA6 775 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 TRIM44Q96DX7 344 aaPredicted RBP17.8■□□□□ 0.44
SNHG6-201ENST00000520348 FIZ1Q96SL8 496 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 FGFBP2Q9BYJ0 223 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
SNHG6-201ENST00000520348 SAMM50Q9Y512 469 aa17.8■□□□□ 0.44
SNHG6-201ENST00000520348 UBE4BO95155 1302 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 RBM47A0AV96 593 aaKnown RBP17.79■□□□□ 0.44
SNHG6-201ENST00000520348 GOLGA6L6A8MZA4 724 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 RSPH10B2B2RC85 870 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 COBLO75128 1261 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 TBCAO75347 108 aaKnown RBP17.79■□□□□ 0.44
SNHG6-201ENST00000520348 KIF20AO95235 890 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 RSPH10BP0C881 870 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 EEF1GP26641 437 aaKnown RBP17.79■□□□□ 0.44
SNHG6-201ENST00000520348 UBASH3AP57075 661 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
SNHG6-201ENST00000520348 ANKRD40Q6AI12 368 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 MIS18BP1Q6P0N0 1132 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 PADI6Q6TGC4 694 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 METTL7BQ6UX53 244 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 SEPT14Q6ZU15 432 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 GPR142Q7Z601 462 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 CCDC60Q8IWA6 550 aaPredicted RBP17.79■□□□□ 0.44
SNHG6-201ENST00000520348 DAW1Q8N136 415 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 SCFD1Q8WVM8 642 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 CCDC102AQ96A19 550 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 NAP1L5Q96NT1 182 aaPredicted RBP17.79■□□□□ 0.44
SNHG6-201ENST00000520348 CTAGE1Q96RT6 745 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 KCTD10Q9H3F6 313 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 IMPACTQ9P2X3 320 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 DDX41Q9UJV9 622 aaKnown RBP17.79■□□□□ 0.44
SNHG6-201ENST00000520348 TELO2Q9Y4R8 837 aa17.79■□□□□ 0.44
SNHG6-201ENST00000520348 SLC15A5A6NIM6 579 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 EIF3DO15371 548 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNHG6-201ENST00000520348 SERPINC1P01008 464 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
SNHG6-201ENST00000520348 PBX1P40424 430 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 IRF5Q13568 498 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 NR1I3Q14994 352 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 TCP11X2Q5H9J9 407 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 C17orf99Q6UX52 265 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 LRRC55Q6ZSA7 311 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 ANO5Q75V66 913 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 IFNL1Q8IU54 200 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 VSTM4Q8IW00 320 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 TRIM47Q96LD4 638 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 KATNBL1Q9H079 304 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 PARVGQ9HBI0 331 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 GABBR1Q9UBS5 961 aa17.78■□□□□ 0.44
SNHG6-201ENST00000520348 MAFBQ9Y5Q3 323 aaPredicted RBP17.78■□□□□ 0.44
SNHG6-201ENST00000520348 GSTTP1A0A1W2PQM5 241 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 FAM13AO94988 1023 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 ARIH2O95376 493 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 KRT31Q15323 416 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 TPD52L1Q16890 204 aaPredicted RBP17.77■□□□□ 0.44
SNHG6-201ENST00000520348 CCDC144BQ3MJ40 725 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 WDR78Q5VTH9 848 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 PPP4R3CPQ6ZMV5 832 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 ARMCX2Q7L311 632 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 CYFIP1Q7L576 1253 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 PLEKHH3Q7Z736 793 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 MSL3Q8N5Y2 521 aaKnown RBP17.77■□□□□ 0.44
SNHG6-201ENST00000520348 CSGALNACT2Q8N6G5 542 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 ZNF507Q8TCN5 953 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 AFAP1L1Q8TED9 768 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 STRA6Q9BX79 667 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 VTA1Q9NP79 307 aa17.77■□□□□ 0.44
SNHG6-201ENST00000520348 KCNJ18B7U540 433 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 BACH1O14867 736 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 LGR5O75473 907 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 PPP1R37O75864 691 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 CDK11BP21127 795 aaKnown RBP17.76■□□□□ 0.43
SNHG6-201ENST00000520348 HOXD13P35453 343 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 TM4SF4P48230 202 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 CASP5P51878 434 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 RAD51AP2Q09MP3 1159 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 KCNJ12Q14500 433 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 LRRC41Q15345 812 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 TAF1CQ15572 869 aaPredicted RBP17.76■□□□□ 0.43
SNHG6-201ENST00000520348 EDRF1Q3B7T1 1238 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 XKR3Q5GH77 459 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 MORN1Q5T089 497 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 PCYT2Q99447 389 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 SRRTQ9BXP5 876 aaKnown RBP17.76■□□□□ 0.43
SNHG6-201ENST00000520348 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms