RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 HLA-CQ95604 372 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 ZNF577Q9BSK1 485 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 SH3GLB2Q9NR46 395 aa28.78■■■□□ 2.2
VEGFA-220ENST00000519767 ENPP3O14638 875 aa28.77■■■□□ 2.2
VEGFA-220ENST00000519767 HBP1O60381 514 aa28.77■■■□□ 2.2
VEGFA-220ENST00000519767 IL17RAQ96F46 866 aa28.77■■■□□ 2.2
VEGFA-220ENST00000519767 C17orf80Q9BSJ5 609 aa28.77■■■□□ 2.2
VEGFA-220ENST00000519767 SLC26A6Q9BXS9 759 aa28.77■■■□□ 2.2
VEGFA-220ENST00000519767 TM6SF1Q9BZW5 370 aa28.77■■■□□ 2.2
VEGFA-220ENST00000519767 FAM49AQ9H0Q0 323 aaPredicted RBP28.77■■■□□ 2.2
VEGFA-220ENST00000519767 SMIM35A0A1B0GVV1 85 aa28.76■■■□□ 2.19
VEGFA-220ENST00000519767 BMP1P13497 986 aa28.76■■■□□ 2.19
VEGFA-220ENST00000519767 CIITAP33076 1130 aa28.76■■■□□ 2.19
VEGFA-220ENST00000519767 TRIM22Q8IYM9 498 aa28.76■■■□□ 2.19
VEGFA-220ENST00000519767 DDX39AO00148 427 aaKnown RBP28.75■■■□□ 2.19
VEGFA-220ENST00000519767 CCT2P78371 535 aaKnown RBP28.75■■■□□ 2.19
VEGFA-220ENST00000519767 TFF2Q03403 129 aa28.75■■■□□ 2.19
VEGFA-220ENST00000519767 ZNF746Q6NUN9 644 aaPredicted RBP28.75■■■□□ 2.19
VEGFA-220ENST00000519767 MTHFD1LQ6UB35 978 aa28.75■■■□□ 2.19
VEGFA-220ENST00000519767 ATP8B4Q8TF62 1192 aa28.75■■■□□ 2.19
VEGFA-220ENST00000519767 ZNF274Q96GC6 653 aaPredicted RBP28.75■■■□□ 2.19
VEGFA-220ENST00000519767 FTHL17Q9BXU8 183 aa28.75■■■□□ 2.19
VEGFA-220ENST00000519767 ZNF302Q9NR11 478 aa28.75■■■□□ 2.19
VEGFA-220ENST00000519767 TCEAL9Q9UHQ7 104 aa28.75■■■□□ 2.19
VEGFA-220ENST00000519767 MICAL3Q7RTP6 2002 aa28.74■■■□□ 2.19
VEGFA-220ENST00000519767 RBAK-RBAKDNI3L0D1 243 aa28.74■■■□□ 2.19
VEGFA-220ENST00000519767 EPC2Q52LR7 807 aa28.74■■■□□ 2.19
VEGFA-220ENST00000519767 ZNF484Q5JVG2 852 aa28.74■■■□□ 2.19
VEGFA-220ENST00000519767 SWSAP1Q6NVH7 229 aa28.74■■■□□ 2.19
VEGFA-220ENST00000519767 PDXDC2PQ6P474 469 aa28.74■■■□□ 2.19
VEGFA-220ENST00000519767 UHRF1Q96T88 793 aaPredicted RBP28.74■■■□□ 2.19
VEGFA-220ENST00000519767 CELF4Q9BZC1 486 aaKnown RBP28.74■■■□□ 2.19
VEGFA-220ENST00000519767 NCOA5Q9HCD5 579 aaKnown RBP28.74■■■□□ 2.19
VEGFA-220ENST00000519767 TRPV2Q9Y5S1 764 aa28.74■■■□□ 2.19
VEGFA-220ENST00000519767 ADAMTS3O15072 1205 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 KLRC1P26715 233 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 USP11P51784 963 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 KRT76Q01546 638 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 TOB2Q14106 344 aaPredicted RBP28.73■■■□□ 2.19
VEGFA-220ENST00000519767 PTPROQ16827 1216 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 TMEM192Q8IY95 271 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 SMAP1Q8IYB5 467 aaPredicted RBP28.73■■■□□ 2.19
VEGFA-220ENST00000519767 TRAPPC12Q8WVT3 735 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 ZBTB10Q96DT7 871 aa28.73■■■□□ 2.19
VEGFA-220ENST00000519767 KDM3AQ9Y4C1 1321 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 H3BNC9 293 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 SSRP1Q08945 709 aaKnown RBP28.72■■■□□ 2.19
VEGFA-220ENST00000519767 PRR16Q569H4 304 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 FAM177A1Q8N128 213 aaPredicted RBP28.72■■■□□ 2.19
VEGFA-220ENST00000519767 FIBCD1Q8N539 461 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 C22orf23Q9BZE7 217 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 AGO3Q9H9G7 860 aaKnown RBP28.72■■■□□ 2.19
VEGFA-220ENST00000519767 PCDHA10Q9Y5I2 948 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 MAFBQ9Y5Q3 323 aaPredicted RBP28.72■■■□□ 2.19
VEGFA-220ENST00000519767 XIRP2A4UGR9 3374 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 COL1A2P08123 1366 aa28.72■■■□□ 2.19
VEGFA-220ENST00000519767 CPLX1O14810 134 aa28.71■■■□□ 2.19
VEGFA-220ENST00000519767 PSAPP07602 524 aa28.71■■■□□ 2.19
VEGFA-220ENST00000519767 CD52P31358 61 aa28.71■■■□□ 2.19
VEGFA-220ENST00000519767 NLRP5P59047 1200 aa28.71■■■□□ 2.19
VEGFA-220ENST00000519767 CPLX2Q6PUV4 134 aaKnown RBP28.71■■■□□ 2.19
VEGFA-220ENST00000519767 CCDC60Q8IWA6 550 aaPredicted RBP28.71■■■□□ 2.19
VEGFA-220ENST00000519767 MRPL38Q96DV4 380 aaKnown RBP28.71■■■□□ 2.19
VEGFA-220ENST00000519767 VPS54Q9P1Q0 977 aa28.71■■■□□ 2.19
VEGFA-220ENST00000519767 PPFIA3O75145 1194 aa28.7■■■□□ 2.18
VEGFA-220ENST00000519767 BBXQ8WY36 941 aaPredicted RBP28.7■■■□□ 2.18
VEGFA-220ENST00000519767 PADI3Q9ULW8 664 aa28.7■■■□□ 2.18
VEGFA-220ENST00000519767 RWDD3Q9Y3V2 267 aa28.7■■■□□ 2.18
VEGFA-220ENST00000519767 IGSF9BQ9UPX0 1349 aa28.69■■■□□ 2.18
VEGFA-220ENST00000519767 RB1P06400 928 aa28.69■■■□□ 2.18
VEGFA-220ENST00000519767 TMEM62Q0P6H9 643 aa28.69■■■□□ 2.18
VEGFA-220ENST00000519767 GPM6BQ13491 265 aa28.69■■■□□ 2.18
VEGFA-220ENST00000519767 CKAP2LQ8IYA6 745 aa28.69■■■□□ 2.18
VEGFA-220ENST00000519767 RASGRP4Q8TDF6 673 aa28.69■■■□□ 2.18
VEGFA-220ENST00000519767 DEXIO95424 95 aa28.68■■■□□ 2.18
VEGFA-220ENST00000519767 KCNQ1P51787 676 aa28.68■■■□□ 2.18
VEGFA-220ENST00000519767 PAK2Q13177 524 aa28.68■■■□□ 2.18
VEGFA-220ENST00000519767 KIAA0319LQ8IZA0 1049 aa28.68■■■□□ 2.18
VEGFA-220ENST00000519767 RIT2Q99578 217 aa28.68■■■□□ 2.18
VEGFA-220ENST00000519767 PDRG1Q9NUG6 133 aa28.68■■■□□ 2.18
VEGFA-220ENST00000519767 COL4A6Q14031 1691 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 ATP4AP20648 1035 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 ODR4Q5SWX8 454 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 GALNT17Q6IS24 598 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 RTN4RL1Q86UN2 441 aaPredicted RBP28.67■■■□□ 2.18
VEGFA-220ENST00000519767 LENG9Q96B70 501 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 ZNF689Q96CS4 500 aaPredicted RBP28.67■■■□□ 2.18
VEGFA-220ENST00000519767 UIMC1Q96RL1 719 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 PCDHA4Q9UN74 947 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 CEP131Q9UPN4 1083 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 SAMM50Q9Y512 469 aa28.67■■■□□ 2.18
VEGFA-220ENST00000519767 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.66■■■□□ 2.18
VEGFA-220ENST00000519767 C5orf67F2Z3F1 127 aa28.66■■■□□ 2.18
VEGFA-220ENST00000519767 STAG3L1P0CL83 205 aa28.66■■■□□ 2.18
VEGFA-220ENST00000519767 BMPR1AP36894 532 aa28.66■■■□□ 2.18
VEGFA-220ENST00000519767 ERICH6BQ5W0A0 696 aa28.66■■■□□ 2.18
VEGFA-220ENST00000519767 UPF3BQ9BZI7 483 aaKnown RBP28.66■■■□□ 2.18
VEGFA-220ENST00000519767 RNF216Q9NWF9 866 aaPredicted RBP28.66■■■□□ 2.18
VEGFA-220ENST00000519767 MUC3AQ02505 3323 aa28.65■■■□□ 2.18
VEGFA-220ENST00000519767 WDR64B1ANS9 1081 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms