RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZNF286BP0CG31 522 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 MTHFRP42898 656 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 ZAP70P43403 619 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 ALDH5A1P51649 535 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 LIMK1P53667 647 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 ITIH3Q06033 890 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 EXOSC9Q06265 439 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 KLRC3Q07444 240 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 PPP2R5BQ15173 497 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 SF3A2Q15428 464 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 IL31Q6EBC2 164 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 KIAA1841Q6NSI8 718 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 SLC44A3Q8N4M1 653 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 C7orf31Q8N865 590 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 ST13P5Q8NFI4 369 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 NLRP7Q8WX94 980 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 COPRSQ9NQ92 184 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 MCM9Q9NXL9 1143 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 SALL2Q9Y467 1007 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 FANCIQ9NVI1 1328 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 PLXNA4Q9HCM2 1894 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 LRP3O75074 770 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 FGF18O76093 207 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 TXNP10599 105 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 OAZ1P54368 228 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 RELNP78509 3460 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 PDE4BQ07343 736 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 BAATQ14032 418 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 LY6KQ17RY6 165 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 KIAA0753Q2KHM9 967 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 LAIR1Q6GTX8 287 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 CMTR2Q8IYT2 770 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 BORCS6Q96GS4 357 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 ARHGEF3Q9NR81 526 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 DBR1Q9UK59 544 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 RAI2Q9Y5P3 530 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 NBPF19A0A087WUL8 3843 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 LAMA1P25391 3075 aa8.16□□□□□ -1.1
CTNNA1-216ENST00000519489 DOPEY1Q5JWR5 2465 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 KIAA1671Q9BY89 1806 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 NKRFO15226 690 aaKnown RBP eCLIP8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 TREHO43280 583 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 F2P00734 622 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 CHRNA1P02708 482 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 ALAS1P13196 640 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 EDNRBP24530 442 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 HOXC8P31273 242 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 CDK8P49336 464 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 SRSF5Q13243 272 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 TPRNQ4KMQ1 711 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 BRDTQ58F21 947 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 PLA2G2CQ5R387 149 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 CES5AQ6NT32 575 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 XRRA1Q6P2D8 792 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 NSMFQ6X4W1 530 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 PROSER1Q86XN7 944 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 SDR42E1Q8WUS8 393 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 CRELD1Q96HD1 420 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 KANSL2Q9H9L4 492 aa8.15□□□□□ -1.1
CTNNA1-216ENST00000519489 TICRRQ7Z2Z1 1910 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 CLASP2O75122 1294 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 RFX1P22670 979 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 STARD6P59095 220 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 UBE3AQ05086 875 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 ZNF252P-AS1Q0IIN9 211 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 C19orf57Q0VDD7 668 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 TROAPQ12815 778 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 LPIN1Q14693 890 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 STPG1Q5TH74 334 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 DCLRE1AQ6PJP8 1040 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 SLC30A10Q6XR72 485 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 CHST3Q7LGC8 479 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 SCFD2Q8WU76 684 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 CASP10Q92851 521 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 DDX23Q9BUQ8 820 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 EHMT1Q9H9B1 1298 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 DCP1AQ9NPI6 582 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 PRMT8Q9NR22 394 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 TMEM260Q9NX78 707 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 KLK13Q9UKR3 277 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 SLC27A5Q9Y2P5 690 aa8.14□□□□□ -1.11
CTNNA1-216ENST00000519489 SPTAN1Q13813 2472 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 NAV1Q8NEY1 1877 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 RAD50Q92878 1312 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 PYCARD-AS1I3L0S3 204 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 NFIBO00712 420 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 PRKAB2O43741 272 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 DGAT1O75907 488 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 GHRP10912 638 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 SRFP11831 508 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 CD46P15529 392 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 EPCAMP16422 314 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 CD72P21854 359 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 HOXC13P31276 330 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 ATP8B2P98198 1209 aa8.13□□□□□ -1.11
CTNNA1-216ENST00000519489 FZD5Q13467 585 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms