RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CCDC34Q96HJ3 373 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 CTAGE1Q96RT6 745 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 PCYT2Q99447 389 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 NOC4LQ9BVI4 516 aaKnown RBP8.54□□□□□ -1.04
SDCBP-206ENST00000519115 SEZ6LQ9BYH1 1024 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
SDCBP-206ENST00000519115 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 ZNF215Q9UL58 517 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-206ENST00000519115 NOD1Q9Y239 953 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
SDCBP-206ENST00000519115 ARID2Q68CP9 1835 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 WNT7AO00755 349 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 BACH1O14867 736 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 TBX3O15119 743 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 CHMP2AO43633 222 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 GAS7O60861 476 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 TIMP1P01033 207 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 SUPT20HL2P0C7V6 817 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 LONP1P36776 959 aaKnown RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 CLCN6P51797 869 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 EPHB4P54760 987 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 CCL23P55773 120 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 ATP2C1P98194 919 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 FPGSQ05932 587 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 PDIA5Q14554 519 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 AXDND1Q5T1B0 1012 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 LRCH2Q5VUJ6 765 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 SESTD1Q86VW0 696 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 KRI1Q8N9T8 703 aaKnown RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 FOXD4L4Q8WXT5 416 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 AK8Q96MA6 479 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 WNT8AQ9H1J5 351 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 RNPEPQ9H4A4 650 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 DDX25Q9UHL0 483 aaKnown RBP8.53□□□□□ -1.04
SDCBP-206ENST00000519115 TCEAL9Q9UHQ7 104 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 PCDHA7Q9UN72 937 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 EMSYQ7Z589 1322 aa8.53□□□□□ -1.04
SDCBP-206ENST00000519115 C17orf102A2RUQ5 167 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 CCNT1O60563 726 aaKnown RBP8.52□□□□□ -1.05
SDCBP-206ENST00000519115 LGR5O75473 907 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ACRP10323 421 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 CSF2RAP15509 400 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ATP2B1P20020 1258 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 BMP8BP34820 402 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ME1P48163 572 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF445P59923 1031 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 IGBP1P78318 339 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 KRT76Q01546 638 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 FAM160A1Q05DH4 1040 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 PPFIA1Q13136 1202 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 Q4G0T1 1027 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 TPRNQ4KMQ1 711 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 HABP4Q5JVS0 413 aaKnown RBP8.52□□□□□ -1.05
SDCBP-206ENST00000519115 TTC38Q5R3I4 469 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 MFSD5Q6N075 450 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF746Q6NUN9 644 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-206ENST00000519115 RBM43Q6ZSC3 357 aaKnown RBP8.52□□□□□ -1.05
SDCBP-206ENST00000519115 TRMT1LQ7Z2T5 733 aaKnown RBP8.52□□□□□ -1.05
SDCBP-206ENST00000519115 CCDC60Q8IWA6 550 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-206ENST00000519115 C4orf32Q8N8J7 132 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ENGASEQ8NFI3 743 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ETNPPLQ8TBG4 499 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 GPT2Q8TD30 523 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 LMBR1Q8WVP7 490 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 TRAPPC12Q8WVT3 735 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 MRPS27Q92552 414 aaKnown RBP8.52□□□□□ -1.05
SDCBP-206ENST00000519115 SLC5A5Q92911 643 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ATP6V0A1Q93050 837 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 WNT8BQ93098 351 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 SCLYQ96I15 445 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 MBOAT7Q96N66 472 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 TEKT3Q9BXF9 490 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 UNC45AQ9H3U1 944 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 SMARCAD1Q9H4L7 1026 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 AZI2Q9H6S1 392 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 TBC1D22BQ9NU19 505 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 SETD4Q9NVD3 440 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 ERAP1Q9NZ08 941 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 TRPC6Q9Y210 931 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 SAMM50Q9Y512 469 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 CLIC4Q9Y696 253 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 PTPRSQ13332 1948 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 MYO9BQ13459 2157 aa8.52□□□□□ -1.05
SDCBP-206ENST00000519115 MICAL3Q7RTP6 2002 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 TREHO43280 583 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 PSMD10O75832 226 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 ATG7O95352 703 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 HOXC8P31273 242 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 STAT5BP51692 787 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 PPIGQ13427 754 aaKnown RBP eCLIP8.51□□□□□ -1.05
SDCBP-206ENST00000519115 BFSP2Q13515 415 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 SNW1Q13573 536 aaKnown RBP8.51□□□□□ -1.05
SDCBP-206ENST00000519115 PLCB4Q15147 1175 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms