RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 USP17L6PQ6QN14 398 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 SH3RF1Q7Z6J0 888 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 MMGT1Q8N4V1 131 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 GIMAP8Q8ND71 665 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 COA1Q9GZY4 146 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 TDRD3Q9H7E2 651 aaKnown RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 VPS37BQ9H9H4 285 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 ADAMTS1Q9UHI8 967 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 KCNG1Q9UIX4 513 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 POTEMA6NI47 508 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 ATP5DP30049 168 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 ALDH3A1P30838 453 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 STK4Q13043 487 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 SNCBQ16143 134 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 CCDC14Q49A88 953 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 ANKRD42Q8N9B4 389 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 RSRC1Q96IZ7 334 aaKnown RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 RBM12Q9NTZ6 932 aaKnown RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 SPATA31A5Q5VU36 1347 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 SPATA31A7Q8IWB4 1347 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 PLA2G4BP0C869 781 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 EIF2AK2P19525 551 aaKnown RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 SYDE2Q5VT97 1194 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 DENND2CQ68D51 928 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 STAG2Q8N3U4 1231 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 FAM84BQ96KN1 310 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 AP1M1Q9BXS5 423 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 TRIM9Q9C026 710 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 RAB17Q9H0T7 212 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 RIC8AQ9NPQ8 531 aa11.75□□□□□ -0.53
PCDHGA1-202ENST00000517417 USP54Q70EL1 1684 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 KRT14P02533 472 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PDE6CP51160 858 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 LRRC63Q05C16 580 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 NKX1-1Q15270 411 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 SEPT14Q6ZU15 432 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 CTAGE3PQ8IX95 158 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 TMEM60Q9H2L4 133 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 A0A1B0GUA9 196 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 TMEM191BP0C7N4 346 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 NPR1P16066 1061 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 TMOD1P28289 359 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 ADCY8P40145 1251 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PBX1P40424 430 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PSMC4P43686 418 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PMS1P54277 932 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 TROAPQ12815 778 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 SEC23AQ15436 765 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 DCPSQ96C86 337 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 ZIM3Q96PE6 472 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 DMGDHQ9UI17 866 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PCDHA6Q9UN73 950 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PCDHA8Q9Y5H6 950 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 CAPN6Q9Y6Q1 641 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 SYF2O95926 243 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 AARSP49588 968 aaKnown RBP eCLIP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 CTTNQ14247 550 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 UNC13DQ70J99 1090 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 NLRP14Q86W24 1093 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 RUBCNQ92622 972 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 CCSER1Q9C0I3 900 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 NOVA2Q9UNW9 492 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PGRMC1O00264 195 aaKnown RBP11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 KAZNQ674X7 775 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 PIGOQ8TEQ8 1089 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 SLC7A3Q8WY07 619 aa11.74□□□□□ -0.53
PCDHGA1-202ENST00000517417 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 RNF225M0QZC1 329 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 RGS16O15492 202 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 PSMC2P35998 433 aaKnown RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 ATP6V1G3Q96LB4 118 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 NACC1Q96RE7 527 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 WDR11Q9BZH6 1224 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 MYL7Q01449 175 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 GEN1Q17RS7 908 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 HHATQ5VTY9 493 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 PDXDC1Q6P996 788 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 VSIG1Q86XK7 387 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 RNF10Q8N5U6 811 aaKnown RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 MSL3Q8N5Y2 521 aaKnown RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 ARL8AQ96BM9 186 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 ANO3Q9BYT9 981 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 MEFVO15553 781 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 GFPT2O94808 682 aa11.73□□□□□ -0.53
PCDHGA1-202ENST00000517417 AFPP02771 609 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms