RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ZBTB42B2RXF5 422 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 KIF28PB7ZC32 967 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 EML1O00423 815 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 CHMP2AO43633 222 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 ZNF862O60290 1169 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 RSPH10BP0C881 870 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 ATP2B1P20020 1258 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 TRAPPC10P48553 1259 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 IGBP1P78318 339 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 FAM26DQ5JW98 314 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 PSRC1Q6PGN9 363 aaPredicted RBP12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 MTHFD1LQ6UB35 978 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 RUFY4Q6ZNE9 571 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 DEFB128Q7Z7B8 93 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 TUBE1Q9UJT0 475 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 PCDHA2Q9Y5H9 948 aa12.56□□□□□ -0.4
SCARNA20-201ENST00000516768 K7ELQ4 463 aaPredicted RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 SOX1O00570 391 aaPredicted RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 NEMFO60524 1076 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 NBNO60934 754 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 STBD1O95210 358 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 CXCL10P02778 98 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 P4HBP07237 508 aaKnown RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 MCM7P33993 719 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 PSMC5P62195 406 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 SPIRE1Q08AE8 756 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 MBTPS1Q14703 1052 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 EPHA7Q15375 998 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 ZNF174Q15697 407 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 CALCRLQ16602 461 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 UGCGQ16739 394 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 RSPH3Q86UC2 560 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 NME8Q8N427 588 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 DNAJB3Q8WWF6 145 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 FAM167AQ96KS9 214 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 RNPC3Q96LT9 517 aaKnown RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 NIFKQ9BYG3 293 aaKnown RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 FTOQ9C0B1 505 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 TTC12Q9H892 705 aaPredicted RBP12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 KAT6AQ92794 2004 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 COL1A2P08123 1366 aa12.55□□□□□ -0.4
SCARNA20-201ENST00000516768 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 SMIM35A0A1B0GVV1 85 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 H3BQV1 296 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 CHRNA1P02708 482 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 RPLP2P05387 115 aaKnown RBP12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 TXKP42681 527 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 QARSP47897 775 aaKnown RBP12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 XKR3Q5GH77 459 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 TTC38Q5R3I4 469 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 MCTP1Q6DN14 999 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 KIAA0319LQ8IZA0 1049 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 C4orf32Q8N8J7 132 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 ZBTB10Q96DT7 871 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 HSD17B14Q9BPX1 270 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 TMEM60Q9H2L4 133 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 CEP131Q9UPN4 1083 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 IGSF9BQ9UPX0 1349 aa12.54□□□□□ -0.4
SCARNA20-201ENST00000516768 MAGEB2O15479 319 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 SLITRK3O94933 977 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 OATP04181 439 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 ACTN1P12814 892 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 PDCP20941 246 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 SMAD3P84022 425 aaKnown RBP12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 PRKCEQ02156 737 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 IER5Q5VY09 327 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 BANK1Q8NDB2 785 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 LRCH3Q96II8 777 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 CEP89Q96ST8 783 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 OSBPL7Q9BZF2 842 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 NOL7Q9UMY1 257 aaKnown RBP12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 LAMA3Q16787 3333 aa12.53□□□□□ -0.4
SCARNA20-201ENST00000516768 DDX11L8A8MPP1 907 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 DKC1O60832 514 aaKnown RBP eCLIP12.52□□□□□ -0.411e-323■■■□□ 19.2
SCARNA20-201ENST00000516768 C22orf31O95567 290 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 MGAT3Q09327 533 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 PDIA5Q14554 519 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 PLEKHG4Q58EX7 1191 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 NCAPH2Q6IBW4 605 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 CNKSR3Q6P9H4 555 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 ANO5Q75V66 913 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 DBF4BQ8NFT6 615 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 RGL1Q9NZL6 768 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 WRAP73Q9P2S5 460 aaPredicted RBP12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 PCDHB6Q9Y5E3 794 aa12.52□□□□□ -0.41
SCARNA20-201ENST00000516768 ABHD14A-ACY1A0A1B0GW23 586 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms