RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	LDLRAD1	Q5T700	205 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	LCE2C	Q5TA81	110 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ARHGEF16	Q5VV41	709 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SPECC1L	Q69YQ0	1117 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ANKRD40	Q6AI12	368 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ARMCX5	Q6P1M9	558 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NSMF	Q6X4W1	530 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NYAP1	Q6ZVC0	841 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MOB2	Q70IA6	237 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PNMA8A	Q86V59	439 aa	Predicted RBP	4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GPBP1	Q86WP2	473 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CCDC65	Q8IXS2	484 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MB21D1	Q8N884	522 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CHST13	Q8NET6	341 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	HPS3	Q969F9	1004 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GPRASP2	Q96D09	838 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CLMN	Q96JQ2	1002 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NACC1	Q96RE7	527 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RMDN3	Q96TC7	470 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SRRT	Q9BXP5	876 aa	Known RBP	4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SLC4A5	Q9BY07	1137 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KRTAP9-9	Q9BYP9	154 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KRTAP9-4	Q9BYQ2	154 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	FAM117A	Q9C073	453 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TMX1	Q9H3N1	280 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SEMA6B	Q9H3T3	888 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ACAD9	Q9H845	621 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KCND1	Q9NSA2	647 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TBC1D22B	Q9NU19	505 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CYP39A1	Q9NYL5	469 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RGL1	Q9NZL6	768 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PARP14	Q460N5	1801 aa		4.99	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ITIH6	Q6UXX5	1313 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	WDR90	Q96KV7	1748 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854		A0A1W2PQC6	194 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	N4BP3	O15049	544 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CHMP2A	O43633	222 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ATP9A	O75110	1047 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	OFD1	O75665	1012 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CNMD	O75829	334 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	STAM2	O75886	525 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KIF20A	O95235	890 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	LYPLA2	O95372	231 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SSB	P05455	408 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KRT18	P05783	430 aa	Known RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	P4HB	P07237	508 aa	Known RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NR3C2	P08235	984 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MYCL	P12524	364 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SKIL	P12757	684 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	FECH	P22830	423 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SFPQ	P23246	707 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CCND2	P30279	289 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CYP4A11	Q02928	519 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	LRRC63	Q05C16	580 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ZCWPW2	Q504Y3	356 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GPAT2	Q6NUI2	795 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RINT1	Q6NUQ1	792 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GADL1	Q6ZQY3	521 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	C1orf186	Q6ZWK4	172 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	FASTKD5	Q7L8L6	764 aa	Known RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ARMC9	Q7Z3E5	817 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MIER3	Q7Z3K6	550 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NLRX1	Q86UT6	975 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RIOX2	Q8IUF8	465 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	FAM114A1	Q8IWE2	563 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TPH2	Q8IWU9	490 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MYOCD	Q8IZQ8	938 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CSGALNACT2	Q8N6G5	542 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GLIS3	Q8NEA6	775 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ANKRD20A12P	Q8NF67	263 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ZNF507	Q8TCN5	953 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NSUN6	Q8TEA1	469 aa	Known RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TRIM47	Q96LD4	638 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	INPP4A	Q96PE3	977 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PURB	Q96QR8	312 aa	Known RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	IWS1	Q96ST2	819 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SENP7	Q9BQF6	1050 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	REEP2	Q9BRK0	252 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TMUB1	Q9BVT8	246 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	BHMT2	Q9H2M3	363 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	A1CF	Q9NQ94	594 aa	Known RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TAB2	Q9NYJ8	693 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KCND2	Q9NZV8	630 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	BTBD7	Q9P203	1132 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	FBXO40	Q9UH90	709 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	AGTPBP1	Q9UPW5	1226 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	LOC285556	D6RIA3	1793 aa		4.98	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NFASC	O94856	1347 aa		4.97	□□□□□ -1.61
ATP2C1-223	ENST00000515854		A0A0G2JMZ2	1700 aa		4.97	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SCN4A	P35499	1836 aa		4.97	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SMCHD1	A6NHR9	2005 aa		4.97	□□□□□ -1.61
ATP2C1-223	ENST00000515854	OTOF	Q9HC10	1997 aa		4.97	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms