RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.25	□□□□□ -0.29
LMNA-224	ENST00000515711	SAMM50	Q9Y512	469 aa		13.25	□□□□□ -0.29
LMNA-224	ENST00000515711	TRIM49B	A6NDI0	452 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	DDX39A	O00148	427 aa	Known RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	EIF3J	O75822	258 aa	Known RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	FAM13A	O94988	1023 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	TPM1	P09493	284 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	SFPQ	P23246	707 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	EDNRB	P24530	442 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	GUCY2C	P25092	1073 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	GJA5	P36382	358 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	COPB1	P53618	953 aa	Known RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	PSMC5	P62195	406 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	PSMC6	P62333	389 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	CCNA1	P78396	465 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	TRIM14	Q14142	442 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	NR1I3	Q14994	352 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	KRT31	Q15323	416 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	PKN2	Q16513	984 aa	Known RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	CCDC144B	Q3MJ40	725 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	ARSH	Q5FYA8	562 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	RINT1	Q6NUQ1	792 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	ANKRD23	Q86SG2	305 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	LRRC8A	Q8IWT6	810 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	C4orf19	Q8IY42	314 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	ZFP91	Q96JP5	570 aa	Predicted RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	CCDC43	Q96MW1	224 aa	Known RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	KCNF1	Q9H3M0	494 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	RTN4	Q9NQC3	1192 aa	Known RBP	13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	INTS13	Q9NVM9	706 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	NRBP1	Q9UHY1	535 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	PCDHA2	Q9Y5H9	948 aa		13.24	□□□□□ -0.29
LMNA-224	ENST00000515711	SPATA31C2	B4DYI2	1134 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	N4BP3	O15049	544 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	EIF3D	O15371	548 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	PSAP	P07602	524 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	KCNA2	P16389	499 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	ERCC3	P19447	782 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	GCLC	P48506	637 aa	Predicted RBP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	PMS1	P54277	932 aa	Known RBP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	KCTD2	Q14681	263 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	BMT2	Q1RMZ1	405 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	HSP90AA4P	Q58FG1	418 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	ANKRD40	Q6AI12	368 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	KCNV1	Q6PIU1	500 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	C1orf186	Q6ZWK4	172 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	APTX	Q7Z2E3	356 aa	Known RBP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	FAM133A	Q8N9E0	248 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	BANK1	Q8NDB2	785 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	ATP6V0A1	Q93050	837 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	CCDC102A	Q96A19	550 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	DUSP9	Q99956	384 aa	Known RBP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	RUSC1	Q9BVN2	902 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	SRRT	Q9BXP5	876 aa	Known RBP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	JPH1	Q9HDC5	661 aa	Predicted RBP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	ANKEF1	Q9NU02	776 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	PKD2L1	Q9P0L9	805 aa		13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
LMNA-224	ENST00000515711	LGALS16	A8MUM7	142 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	GNA14	O95837	355 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	SLC10A3	P09131	477 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	KCNJ6	P48051	423 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	ZNF131	P52739	623 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	ERVK-9	P63128	1117 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	ERVK-24	P63145	666 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	FKBP3	Q00688	224 aa	Known RBP	13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	ALCAM	Q13740	583 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	EDRF1	Q3B7T1	1238 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	SFR1	Q86XK3	245 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	PIGO	Q8TEQ8	1089 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	CACTIN	Q8WUQ7	758 aa	Known RBP	13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	HPS3	Q969F9	1004 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	CNOT6L	Q96LI5	555 aa	Known RBP	13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	CEP63	Q96MT8	703 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	PURB	Q96QR8	312 aa	Known RBP	13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	MMP19	Q99542	508 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	SEMA6B	Q9H3T3	888 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	ZHX3	Q9H4I2	956 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	PARVG	Q9HBI0	331 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	RBPJL	Q9UBG7	517 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	SLC9A2	Q9UBY0	812 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	PCDHA10	Q9Y5I2	948 aa		13.22	□□□□□ -0.29
LMNA-224	ENST00000515711	CCL15-CCL14	A0A0B4J2E2	113 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711		A0A1W2PQC6	194 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	CALU	O43852	315 aa	Predicted RBP	13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	ATP9A	O75110	1047 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	TBC1D8	O95759	1140 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	MAPT	P10636	758 aa	Known RBP	13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	PBX1	P40424	430 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	DNM2	P50570	870 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	TBX2	Q13207	712 aa	Predicted RBP	13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	CCL15	Q16663	113 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	ZCWPW2	Q504Y3	356 aa		13.21	□□□□□ -0.29
LMNA-224	ENST00000515711	MIS18BP1	Q6P0N0	1132 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms