RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 ERMNQ8TAM6 284 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 CAGE1Q8TC20 777 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 CTAGE1Q96RT6 745 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 EIF2AK1Q9BQI3 630 aaKnown RBP28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 NOC4LQ9BVI4 516 aaKnown RBP28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 STK24Q9Y6E0 443 aa28.36■■■□□ 2.13
SPOCK3-224ENST00000515316 ARL6IP4Q66PJ3 421 aaKnown RBP28.35■■■□□ 2.13
SPOCK3-224ENST00000515316 TRMT1LQ7Z2T5 733 aaKnown RBP28.35■■■□□ 2.13
SPOCK3-224ENST00000515316 DYDC2Q96IM9 177 aa28.35■■■□□ 2.13
SPOCK3-224ENST00000515316 PPP1R12CQ9BZL4 782 aa28.35■■■□□ 2.13
SPOCK3-224ENST00000515316 ZSWIM4Q9H7M6 989 aa28.35■■■□□ 2.13
SPOCK3-224ENST00000515316 MYH9P35579 1960 aaKnown RBP28.35■■■□□ 2.13
SPOCK3-224ENST00000515316 PITPNM1O00562 1244 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 SLITRK3O94933 977 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 SF3A1Q15459 793 aaKnown RBP28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 TAF2Q6P1X5 1199 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 C4orf19Q8IY42 314 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 HSD17B14Q9BPX1 270 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 RGL1Q9NZL6 768 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 DAXXQ9UER7 740 aaPredicted RBP28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 LRWD1Q9UFC0 647 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 TUBE1Q9UJT0 475 aa28.34■■■□□ 2.13
SPOCK3-224ENST00000515316 KAT6AQ92794 2004 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 MBLAC1A4D2B0 266 aaPredicted RBP28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 POTEMA6NI47 508 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 DDX11L8A8MPP1 907 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 RPLP2P05387 115 aaKnown RBP28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 ANP32AP39687 249 aaKnown RBP28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 MARCH8Q5T0T0 291 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 PRPF38BQ5VTL8 546 aaKnown RBP28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 MFSD5Q6N075 450 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 TPH2Q8IWU9 490 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 TMEM199Q8N511 208 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 BADQ92934 168 aa28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 ZNF396Q96N95 335 aaPredicted RBP28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 NIFKQ9BYG3 293 aaKnown RBP28.33■■■□□ 2.13
SPOCK3-224ENST00000515316 F13A1P00488 732 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 ITGB8P26012 769 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 CYP2C18P33260 490 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 FOXD4L5Q5VV16 416 aaPredicted RBP28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 FAM173BQ6P4H8 233 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 OTUD6AQ7L8S5 288 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 FOXD4L4Q8WXT5 416 aaPredicted RBP28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 LXNQ9BS40 222 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 TUFT1Q9NNX1 390 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 PCDHA2Q9Y5H9 948 aa28.32■■■□□ 2.12
SPOCK3-224ENST00000515316 MAGEB2O15479 319 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 KLRC1P26715 233 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 MDM2Q00987 491 aaPredicted RBP28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 CYP4A11Q02928 519 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 RBL2Q08999 1139 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 CTTNQ14247 550 aaKnown RBP28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 MTHFD1LQ6UB35 978 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 RSPH3Q86UC2 560 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 IGSF22Q8N9C0 903 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 TRAPPC12Q8WVT3 735 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 DHX38Q92620 1227 aaKnown RBP28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 POLR3CQ9BUI4 534 aaPredicted RBP28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 SEPT9Q9UHD8 586 aaPredicted RBP28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 CLIC4Q9Y696 253 aa28.31■■■□□ 2.12
SPOCK3-224ENST00000515316 CAND2O75155 1236 aa28.3■■■□□ 2.12
SPOCK3-224ENST00000515316 STBD1O95210 358 aa28.3■■■□□ 2.12
SPOCK3-224ENST00000515316 LYPLA2O95372 231 aa28.3■■■□□ 2.12
SPOCK3-224ENST00000515316 MAGEA10P43363 369 aaPredicted RBP28.3■■■□□ 2.12
SPOCK3-224ENST00000515316 PKP1Q13835 747 aa28.3■■■□□ 2.12
SPOCK3-224ENST00000515316 HAUS3Q68CZ6 603 aa28.3■■■□□ 2.12
SPOCK3-224ENST00000515316 ZBTB42B2RXF5 422 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 PARNO95453 639 aaKnown RBP28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 CKBP12277 381 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 SELPP16109 830 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 RPA1P27694 616 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 THPOP40225 353 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 CCL23P55773 120 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 FPGSQ05932 587 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 IL17AQ16552 155 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 TRIM71Q2Q1W2 868 aaKnown RBP28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 RPAINQ86UA6 219 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 PPME1Q9Y570 386 aa28.29■■■□□ 2.12
SPOCK3-224ENST00000515316 WDR81Q562E7 1941 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 UMODL1Q5DID0 1318 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 SMIM35A0A1B0GVV1 85 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 VWA3AA6NCI4 1184 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 BRD1O95696 1058 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 XRCC6P12956 609 aaKnown RBP eCLIP28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 MUTP22033 750 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 PPIGQ13427 754 aaKnown RBP eCLIP28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 TARBP2Q15633 366 aaKnown RBP28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 KRT79Q5XKE5 535 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 ATL3Q6DD88 541 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 ANO5Q75V66 913 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 CATSPER3Q86XQ3 398 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 NME8Q8N427 588 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 GDF15Q99988 308 aa28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 WRAP73Q9P2S5 460 aaPredicted RBP28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 TRIP12Q14669 1992 aaPredicted RBP28.28■■■□□ 2.12
SPOCK3-224ENST00000515316 IQCF3P0C7M6 154 aa28.27■■■□□ 2.12
SPOCK3-224ENST00000515316 YWHABP31946 246 aaKnown RBP28.27■■■□□ 2.12
SPOCK3-224ENST00000515316 RFC2P35250 354 aa28.27■■■□□ 2.12
SPOCK3-224ENST00000515316 CEBPZQ03701 1054 aaKnown RBP28.27■■■□□ 2.12
SPOCK3-224ENST00000515316 PTPAQ15257 358 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms