RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 SMC3Q9UQE7 1217 aa14.08□□□□□ -0.16
PTCD2-210ENST00000515198 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.16
PTCD2-210ENST00000515198 TRIOBPQ9H2D6 2365 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 MBLAC1A4D2B0 266 aaPredicted RBP14.07□□□□□ -0.16
PTCD2-210ENST00000515198 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 GJB2P29033 226 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 OTOP2Q7RTS6 562 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 BBXQ8WY36 941 aaPredicted RBP14.07□□□□□ -0.16
PTCD2-210ENST00000515198 FAM167AQ96KS9 214 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 IGSF9BQ9UPX0 1349 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 COL1A2P08123 1366 aa14.07□□□□□ -0.16
PTCD2-210ENST00000515198 SOX1O00570 391 aaPredicted RBP14.06□□□□□ -0.16
PTCD2-210ENST00000515198 NEMFO60524 1076 aa14.06□□□□□ -0.16
PTCD2-210ENST00000515198 PPP2R5CQ13362 524 aa14.06□□□□□ -0.16
PTCD2-210ENST00000515198 CALCRLQ16602 461 aa14.06□□□□□ -0.16
PTCD2-210ENST00000515198 ZNF484Q5JVG2 852 aa14.06□□□□□ -0.16
PTCD2-210ENST00000515198 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
PTCD2-210ENST00000515198 NOSTRINQ8IVI9 506 aa14.06□□□□□ -0.16
PTCD2-210ENST00000515198 NOL7Q9UMY1 257 aaKnown RBP14.06□□□□□ -0.16
PTCD2-210ENST00000515198 CEP131Q9UPN4 1083 aa14.06□□□□□ -0.16
PTCD2-210ENST00000515198 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
PTCD2-210ENST00000515198 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
PTCD2-210ENST00000515198 ZBBXA8MT70 800 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 ATP2B1P20020 1258 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 ATP4AP20648 1035 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 ORC2Q13416 577 aaPredicted RBP14.05□□□□□ -0.16
PTCD2-210ENST00000515198 RASIP1Q5U651 963 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 GPR153Q6NV75 609 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 B3GNT9Q6UX72 402 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 RUFY4Q6ZNE9 571 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 TRMT1LQ7Z2T5 733 aaKnown RBP14.05□□□□□ -0.16
PTCD2-210ENST00000515198 RPAINQ86UA6 219 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 TRAPPC12Q8WVT3 735 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 HAS1Q92839 578 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 NRBP2Q9NSY0 501 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 PCDHA2Q9Y5H9 948 aa14.05□□□□□ -0.16
PTCD2-210ENST00000515198 SMIM35A0A1B0GVV1 85 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 H3BQV1 296 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 M0QZ92 97 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 DKC1O60832 514 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTCD2-210ENST00000515198 NBNO60934 754 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 BAIAP3O94812 1187 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 CXCL10P02778 98 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 OATP04181 439 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 CTSHP09668 335 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 U2AF2P26368 475 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTCD2-210ENST00000515198 KLRC1P26715 233 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 MCM7P33993 719 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 TRAPPC10P48553 1259 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
PTCD2-210ENST00000515198 PRKCEQ02156 737 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 CUL4AQ13619 759 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 FAM26DQ5JW98 314 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 MCTP1Q6DN14 999 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 CNKSR3Q6P9H4 555 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 DNAJB3Q8WWF6 145 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 VWCEQ96DN2 955 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 FAM49AQ9H0Q0 323 aaPredicted RBP14.04□□□□□ -0.16
PTCD2-210ENST00000515198 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 PCDHA12Q9UN75 941 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 SLC4A7Q9Y6M7 1214 aa14.04□□□□□ -0.16
PTCD2-210ENST00000515198 KIF28PB7ZC32 967 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 EML1O00423 815 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 WNT7AO00755 349 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 ZNF862O60290 1169 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 KCNJ6P48051 423 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 PSMC5P62195 406 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 IKBKEQ14164 716 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 GPNMBQ14956 572 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 UGCGQ16739 394 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 XKR3Q5GH77 459 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 TTC38Q5R3I4 469 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 IER5Q5VY09 327 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 LARP1BQ659C4 914 aaKnown RBP14.03□□□□□ -0.16
PTCD2-210ENST00000515198 NCAPH2Q6IBW4 605 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 NME8Q8N427 588 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 BANK1Q8NDB2 785 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 TTC12Q9H892 705 aaPredicted RBP14.03□□□□□ -0.16
PTCD2-210ENST00000515198 CXXC1Q9P0U4 656 aaPredicted RBP14.03□□□□□ -0.16
PTCD2-210ENST00000515198 TET1Q8NFU7 2136 aa14.03□□□□□ -0.16
PTCD2-210ENST00000515198 EVPLQ92817 2033 aa14.02□□□□□ -0.16
PTCD2-210ENST00000515198 ABHD14A-ACY1A0A1B0GW23 586 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 ZBTB42B2RXF5 422 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 K7ELQ4 463 aaPredicted RBP14.02□□□□□ -0.17
PTCD2-210ENST00000515198 MAGEB2O15479 319 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 EFCAB14O75071 495 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 CHRNA1P02708 482 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 P4HBP07237 508 aaKnown RBP14.02□□□□□ -0.17
PTCD2-210ENST00000515198 TXKP42681 527 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 QARSP47897 775 aaKnown RBP14.02□□□□□ -0.17
PTCD2-210ENST00000515198 MRPS6P82932 125 aaKnown RBP14.02□□□□□ -0.17
PTCD2-210ENST00000515198 MBTPS1Q14703 1052 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 EPHA7Q15375 998 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 ZNF174Q15697 407 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 ZBTB10Q96DT7 871 aa14.02□□□□□ -0.17
PTCD2-210ENST00000515198 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms