RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 TSG101Q99816 390 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 TIPINQ9BVW5 301 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 ZSWIM4Q9H7M6 989 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 ODF2LQ9ULJ1 636 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 MAPK8IP1Q9UQF2 711 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 COL4A3BPQ9Y5P4 624 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 NFASCO94856 1347 aa11.32□□□□□ -0.6
SNF8-214ENST00000515174 LOC102724159A0A0B4J2E5 919 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 AKR1B15C9JRZ8 316 aaPredicted RBP11.31□□□□□ -0.6
SNF8-214ENST00000515174 ARHGAP6O43182 974 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNF8-214ENST00000515174 SLC25A27O95847 323 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 ALDH1A1P00352 501 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 TPM2P07951 284 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
SNF8-214ENST00000515174 ICAM3P32942 547 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 JAK3P52333 1124 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 PWP2Q15269 919 aaKnown RBP11.31□□□□□ -0.6
SNF8-214ENST00000515174 FIGNQ5HY92 759 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 ZNF746Q6NUN9 644 aaPredicted RBP11.31□□□□□ -0.6
SNF8-214ENST00000515174 NSMFQ6X4W1 530 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 SLC30A10Q6XR72 485 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 MIER3Q7Z3K6 550 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 PPFIBP1Q86W92 1011 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 TMEM139Q8IV31 216 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 C4orf19Q8IY42 314 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 TMEM174Q8WUU8 243 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 DYDC2Q96IM9 177 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 ERGIC2Q96RQ1 377 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 KCTD10Q9H3F6 313 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 R3HDMLQ9H3Y0 253 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 A1CFQ9NQ94 594 aaKnown RBP11.31□□□□□ -0.6
SNF8-214ENST00000515174 AGTPBP1Q9UPW5 1226 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 TRAF3IP3Q9Y228 551 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 PFASO15067 1338 aa11.31□□□□□ -0.6
SNF8-214ENST00000515174 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
SNF8-214ENST00000515174 KIF2AO00139 706 aaPredicted RBP11.3□□□□□ -0.6
SNF8-214ENST00000515174 PDXKO00764 312 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 EIF3DO15371 548 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNF8-214ENST00000515174 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNF8-214ENST00000515174 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
SNF8-214ENST00000515174 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
SNF8-214ENST00000515174 UBXN2AP68543 259 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 ITGB3BPQ13352 177 aaPredicted RBP11.3□□□□□ -0.6
SNF8-214ENST00000515174 MOGSQ13724 837 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 TPH2Q8IWU9 490 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 GTF3C2Q8WUA4 911 aaPredicted RBP11.3□□□□□ -0.6
SNF8-214ENST00000515174 SCFD1Q8WVM8 642 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 ANKEF1Q9NU02 776 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 KIAA1217Q5T5P2 1943 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 LOXHD1Q8IVV2 1947 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 MCM3APO60318 1980 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 UBE4BO95155 1302 aa11.3□□□□□ -0.6
SNF8-214ENST00000515174 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 WDR64B1ANS9 1081 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 B4DLN1 442 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 SPATA31C2B4DYI2 1134 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 EIF3JO75822 258 aaKnown RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 TPM1P09493 284 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 CYP4A11Q02928 519 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 MYBPC2Q14324 1141 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 MAN2A1Q16706 1144 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 KNOP1Q1ED39 458 aaKnown RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 GNPTABQ3T906 1256 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 HSP90AA4PQ58FG1 418 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 SPRYD7Q5W111 196 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 SMAP1Q8IYB5 467 aaPredicted RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 CCAR2Q8N163 923 aaKnown RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 SLC17A8Q8NDX2 589 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 HPS3Q969F9 1004 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 SLC10A4Q96EP9 437 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 CNOT6LQ96LI5 555 aaKnown RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 BAG1Q99933 345 aaPredicted RBP11.29□□□□□ -0.6
SNF8-214ENST00000515174 LXNQ9BS40 222 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 EDEM3Q9BZQ6 932 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 VPS16Q9H269 839 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 ZNF236Q9UL36 1845 aa11.29□□□□□ -0.6
SNF8-214ENST00000515174 A0A1W2PQJ5 194 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 GOLGA6L9A6NEM1 432 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 MANSC4A6NHS7 340 aaPredicted RBP11.28□□□□□ -0.6
SNF8-214ENST00000515174 MFAP3LO75121 409 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 TBCAO75347 108 aaKnown RBP11.28□□□□□ -0.6
SNF8-214ENST00000515174 TGFB3P10600 412 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 OSBPP22059 807 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 EDNRBP24530 442 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 PSMC5P62195 406 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms