RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.73■■■□□ 2.03
SNF8-213ENST00000514929 CKAP2LQ8IYA6 745 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 MYOCDQ8IZQ8 938 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 NECAB1Q8N987 351 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 RAD9AQ99638 391 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 ORC3Q9UBD5 711 aaPredicted RBP27.73■■■□□ 2.03
SNF8-213ENST00000514929 PCDHA2Q9Y5H9 948 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 PCDHA10Q9Y5I2 948 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 CDY2AQ9Y6F7 541 aa27.73■■■□□ 2.03
SNF8-213ENST00000514929 CTDNEP1O95476 244 aa27.72■■■□□ 2.03
SNF8-213ENST00000514929 MRPS6P82932 125 aaKnown RBP27.72■■■□□ 2.03
SNF8-213ENST00000514929 ADGRE1Q14246 886 aa27.72■■■□□ 2.03
SNF8-213ENST00000514929 WASF1Q92558 559 aa27.72■■■□□ 2.03
SNF8-213ENST00000514929 PHF20Q9BVI0 1012 aa27.72■■■□□ 2.03
SNF8-213ENST00000514929 MICAL3Q7RTP6 2002 aa27.72■■■□□ 2.03
SNF8-213ENST00000514929 GAS7O60861 476 aa27.71■■■□□ 2.03
SNF8-213ENST00000514929 ARHGEF15O94989 841 aa27.71■■■□□ 2.03
SNF8-213ENST00000514929 MKRN4PQ13434 485 aaPredicted RBP27.71■■■□□ 2.03
SNF8-213ENST00000514929 LRCH2Q5VUJ6 765 aa27.71■■■□□ 2.03
SNF8-213ENST00000514929 IER5Q5VY09 327 aa27.71■■■□□ 2.03
SNF8-213ENST00000514929 GTF3C6Q969F1 213 aa27.71■■■□□ 2.03
SNF8-213ENST00000514929 RIT2Q99578 217 aa27.71■■■□□ 2.03
SNF8-213ENST00000514929 CCDC194A0A1B0GVG4 234 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 LCHNA4D1U4 455 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 WDR64B1ANS9 1081 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 M0QZ92 97 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 LARGE1O95461 756 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 TDP2O95551 362 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 Q4G0T1 1027 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 ZNF484Q5JVG2 852 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 MTHFD1LQ6UB35 978 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 TRMT1LQ7Z2T5 733 aaKnown RBP27.7■■■□□ 2.02
SNF8-213ENST00000514929 PPM1EQ8WY54 764 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 ARNTL2Q8WYA1 636 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 SLC5A5Q92911 643 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 TEKT3Q9BXF9 490 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 GABBR1Q9UBS5 961 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 MAFBQ9Y5Q3 323 aaPredicted RBP27.7■■■□□ 2.02
SNF8-213ENST00000514929 MYO9BQ13459 2157 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 COL1A2P08123 1366 aa27.7■■■□□ 2.02
SNF8-213ENST00000514929 CHD7Q9P2D1 2997 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 CYP3A7-CYP3A51PA0A087WV96 503 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 SMIM35A0A1B0GVV1 85 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 CYP3A7P24462 503 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 KLRC1P26715 233 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 TMEM62Q0P6H9 643 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 LPIN1Q14693 890 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 INF2Q27J81 1249 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 BBXQ8WY36 941 aaPredicted RBP27.69■■■□□ 2.02
SNF8-213ENST00000514929 DISC1Q9NRI5 854 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 GJB4Q9NTQ9 266 aa27.69■■■□□ 2.02
SNF8-213ENST00000514929 CHMP2AO43633 222 aa27.68■■■□□ 2.02
SNF8-213ENST00000514929 ATP4AP20648 1035 aa27.68■■■□□ 2.02
SNF8-213ENST00000514929 FBXO47Q5MNV8 452 aa27.68■■■□□ 2.02
SNF8-213ENST00000514929 MOXD1Q6UVY6 613 aa27.68■■■□□ 2.02
SNF8-213ENST00000514929 INSL6Q9Y581 213 aa27.68■■■□□ 2.02
SNF8-213ENST00000514929 TRPV2Q9Y5S1 764 aa27.68■■■□□ 2.02
SNF8-213ENST00000514929 SIP14410 1827 aa27.68■■■□□ 2.02
SNF8-213ENST00000514929 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.67■■■□□ 2.02
SNF8-213ENST00000514929 RFXAPO00287 272 aa27.67■■■□□ 2.02
SNF8-213ENST00000514929 UPP2O95045 317 aa27.67■■■□□ 2.02
SNF8-213ENST00000514929 LETM2Q2VYF4 491 aa27.67■■■□□ 2.02
SNF8-213ENST00000514929 TSHZ1Q6ZSZ6 1077 aa27.67■■■□□ 2.02
SNF8-213ENST00000514929 NME8Q8N427 588 aa27.67■■■□□ 2.02
SNF8-213ENST00000514929 USP38Q8NB14 1042 aa27.67■■■□□ 2.02
SNF8-213ENST00000514929 GJA10Q969M2 543 aa27.67■■■□□ 2.02
SNF8-213ENST00000514929 DDX25Q9UHL0 483 aaKnown RBP27.67■■■□□ 2.02
SNF8-213ENST00000514929 SFNP31947 248 aa27.66■■■□□ 2.02
SNF8-213ENST00000514929 JAK3P52333 1124 aa27.66■■■□□ 2.02
SNF8-213ENST00000514929 TOP1MTQ969P6 601 aa27.66■■■□□ 2.02
SNF8-213ENST00000514929 FAM167AQ96KS9 214 aa27.66■■■□□ 2.02
SNF8-213ENST00000514929 MBOAT7Q96N66 472 aa27.66■■■□□ 2.02
SNF8-213ENST00000514929 UNC45AQ9H3U1 944 aa27.66■■■□□ 2.02
SNF8-213ENST00000514929 MYH9P35579 1960 aaKnown RBP27.66■■■□□ 2.02
SNF8-213ENST00000514929 IGSF9BQ9UPX0 1349 aa27.66■■■□□ 2.02
SNF8-213ENST00000514929 PSMD10O75832 226 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 FDPSP14324 419 aaKnown RBP27.65■■■□□ 2.02
SNF8-213ENST00000514929 CCDC85BQ15834 202 aaPredicted RBP27.65■■■□□ 2.02
SNF8-213ENST00000514929 C8orf34Q49A92 452 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 SPRED2Q7Z698 418 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 NEK8Q86SG6 692 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 OXER1Q8TDS5 423 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 CELF4Q9BZC1 486 aaKnown RBP27.65■■■□□ 2.02
SNF8-213ENST00000514929 CEP131Q9UPN4 1083 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 SQORQ9Y6N5 450 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 UNC80Q8N2C7 3258 aa27.65■■■□□ 2.02
SNF8-213ENST00000514929 LINC01553A4QN01 128 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 EPOPA6NHQ4 379 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 ZBTB42B2RXF5 422 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 GTPBP6O43824 516 aaPredicted RBP27.64■■■□□ 2.02
SNF8-213ENST00000514929 PIK3AP1Q6ZUJ8 805 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 MIER3Q7Z3K6 550 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 MICALL1Q8N3F8 863 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 NSUN7Q8NE18 718 aaKnown RBP27.64■■■□□ 2.02
SNF8-213ENST00000514929 YME1L1Q96TA2 773 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 AGO3Q9H9G7 860 aaKnown RBP27.64■■■□□ 2.02
SNF8-213ENST00000514929 BRMS1Q9HCU9 246 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 MTUS1Q9ULD2 1270 aa27.64■■■□□ 2.02
SNF8-213ENST00000514929 CD52P31358 61 aa27.63■■■□□ 2.01
SNF8-213ENST00000514929 HTRA4P83105 476 aaPredicted RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms