RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 POTEMA6NI47 508 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 CABYRO75952 493 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 SLITRK3O94933 977 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 PGK1P00558 417 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 MYL3P08590 195 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 XRCC6P12956 609 aaKnown RBP eCLIP11.36□□□□□ -0.59
NEDD9-214ENST00000513989 RTP1P59025 263 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 NKX3-2P78367 333 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 SPIRE1Q08AE8 756 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 LRRC41Q15345 812 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 TMEM63BQ5T3F8 832 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 RRAGBQ5VZM2 374 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 RESP18Q5W5W9 173 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 IQUBQ8NA54 791 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 MRPS27Q92552 414 aaKnown RBP11.36□□□□□ -0.59
NEDD9-214ENST00000513989 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
NEDD9-214ENST00000513989 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 EPSTI1Q96J88 318 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 CHAMP1Q96JM3 812 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 FAM167AQ96KS9 214 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
NEDD9-214ENST00000513989 HSD17B14Q9BPX1 270 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 TSEN34Q9BSV6 310 aaKnown RBP11.36□□□□□ -0.59
NEDD9-214ENST00000513989 KATNAL1Q9BW62 490 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 BCAS3Q9H6U6 928 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 MTMR10Q9NXD2 777 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 ERAP1Q9NZ08 941 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 GABBR1Q9UBS5 961 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 DDX11L8A8MPP1 907 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 KBTBD13C9JR72 458 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 EML1O00423 815 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 LGR5O75473 907 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 MMP3P08254 477 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 KCNA10Q16322 511 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 TRIM60Q495X7 471 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 SH3RF1Q7Z6J0 888 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 CATSPER3Q86XQ3 398 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 C4orf19Q8IY42 314 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 EXOC8Q8IYI6 725 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 FSIP1Q8NA03 581 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 KLHDC9Q8NEP7 349 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 AFAP1L1Q8TED9 768 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 LENG1Q96BZ8 264 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-214ENST00000513989 DYDC2Q96IM9 177 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 MTG1Q9BT17 334 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-214ENST00000513989 LRRC27Q9C0I9 530 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 RGL1Q9NZL6 768 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 USP25Q9UHP3 1055 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 HOOK1Q9UJC3 728 aaKnown RBP11.35□□□□□ -0.59
NEDD9-214ENST00000513989 KCNH3Q9ULD8 1083 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 KIAA1024Q9UPX6 916 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-214ENST00000513989 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
NEDD9-214ENST00000513989 MUC3AQ02505 3323 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 IGKV6D-21A0A0A0MT36 114 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 PP2D1A8MPX8 630 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 H3BRB1 525 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 ADCY6O43306 1168 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 HOXD8P13378 290 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-214ENST00000513989 ITGB8P26012 769 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 CST5P28325 142 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-214ENST00000513989 CDC25AP30304 524 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 MCM4P33991 863 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 SYKP43405 635 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 BEX3Q00994 111 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 AMPD3Q01432 767 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 CYP4A11Q02928 519 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 GRIN1Q05586 938 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 CTTNQ14247 550 aaKnown RBP11.34□□□□□ -0.59
NEDD9-214ENST00000513989 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 KANK3Q6NY19 840 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 CEP57L1Q8IYX8 460 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 BANK1Q8NDB2 785 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 LXNQ9BS40 222 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 SEZ6LQ9BYH1 1024 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 PANK2Q9BZ23 570 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 CUEDC2Q9H467 287 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 TUT1Q9H6E5 874 aaKnown RBP11.34□□□□□ -0.59
NEDD9-214ENST00000513989 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-214ENST00000513989 CHD7Q9P2D1 2997 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 PHF24Q9UPV7 400 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 ATP11BQ9Y2G3 1177 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 PPME1Q9Y570 386 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 REV3LO60673 3130 aa11.34□□□□□ -0.59
NEDD9-214ENST00000513989 A0A1B0GVL5 298 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 POLR2DO15514 142 aaKnown RBP11.33□□□□□ -0.6
NEDD9-214ENST00000513989 HBP1O60381 514 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 ADAMTS4O75173 837 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 LYPLA2O95372 231 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 LGALS2P05162 132 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 ASGR1P07306 291 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 GNAT1P11488 350 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms