RNA–Protein interactions for RNA: ENST00000513944.5

TNPO1-209, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-209ENST00000513944 PROB1E7EW31 1015 aa4.66□□□□□ -1.66
TNPO1-209ENST00000513944 ITGAVP06756 1048 aa4.66□□□□□ -1.66
TNPO1-209ENST00000513944 SNRPB2P08579 225 aaKnown RBP4.66□□□□□ -1.66
TNPO1-209ENST00000513944 CDK4P11802 303 aa4.66□□□□□ -1.66
TNPO1-209ENST00000513944 EIF6P56537 245 aaKnown RBP4.66□□□□□ -1.66
TNPO1-209ENST00000513944 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
TNPO1-209ENST00000513944 SF1Q15637 639 aaKnown RBP4.66□□□□□ -1.66
TNPO1-209ENST00000513944 VRK3Q8IV63 474 aa4.66□□□□□ -1.66
TNPO1-209ENST00000513944 JAM3Q9BX67 310 aa4.66□□□□□ -1.66
TNPO1-209ENST00000513944 AGO3Q9H9G7 860 aaKnown RBP4.66□□□□□ -1.66
TNPO1-209ENST00000513944 LAMC3Q9Y6N6 1575 aa4.65□□□□□ -1.66
TNPO1-209ENST00000513944 TOP2BQ02880 1626 aa4.65□□□□□ -1.66
TNPO1-209ENST00000513944 CD38P28907 300 aa4.65□□□□□ -1.67
TNPO1-209ENST00000513944 PTGS2P35354 604 aa4.65□□□□□ -1.67
TNPO1-209ENST00000513944 TOB2Q14106 344 aaPredicted RBP4.65□□□□□ -1.67
TNPO1-209ENST00000513944 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.67
TNPO1-209ENST00000513944 USP30Q70CQ3 517 aa4.65□□□□□ -1.67
TNPO1-209ENST00000513944 BCL2L13Q9BXK5 485 aa4.65□□□□□ -1.67
TNPO1-209ENST00000513944 NPFFR2Q9Y5X5 522 aa4.65□□□□□ -1.67
TNPO1-209ENST00000513944 CUX1P39880 1505 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 ACOT7O00154 380 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 SCNN1GP51170 649 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 COL9A2Q14055 689 aaPredicted RBP4.64□□□□□ -1.67
TNPO1-209ENST00000513944 RHOUQ7L0Q8 258 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 OTOP3Q7RTS5 596 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 OR6P1Q8NGX9 317 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 UHMK1Q8TAS1 419 aaKnown RBP4.64□□□□□ -1.67
TNPO1-209ENST00000513944 GIPC2Q8TF65 315 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 HAS1Q92839 578 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 C1orf159Q96HA4 380 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 TMEM176AQ96HP8 235 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 SYNPO2LQ9H987 977 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 SLC39A2Q9NP94 309 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 GINM1Q9NU53 330 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 CADPSQ9ULU8 1353 aa4.64□□□□□ -1.67
TNPO1-209ENST00000513944 CPP00450 1065 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 HMGCRP04035 888 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 NAT2P11245 290 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 CASP7P55210 303 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 HGFACQ04756 655 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 PPP2R5EQ16537 467 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 LDLRAD1Q5T700 205 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 DPP8Q6V1X1 898 aaPredicted RBP4.63□□□□□ -1.67
TNPO1-209ENST00000513944 Q6ZRM9 215 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 PPP1R14AQ96A00 147 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 PPARGC1AQ9UBK2 798 aaKnown RBP4.63□□□□□ -1.67
TNPO1-209ENST00000513944 SH3BP1Q9Y3L3 701 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 EEA1Q15075 1411 aa4.63□□□□□ -1.67
TNPO1-209ENST00000513944 FANCD2Q9BXW9 1451 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 PMS2P1A4D2B8 440 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 GRID2IPA4D2P6 1211 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 SOX9P48436 509 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 KCNQ1P51787 676 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 EPHA5P54756 1037 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.62□□□□□ -1.67
TNPO1-209ENST00000513944 TMEM145Q8NBT3 493 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 LENG9Q96B70 501 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 MPHOSPH9Q99550 1183 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 CEP164Q9UPV0 1460 aa4.62□□□□□ -1.67
TNPO1-209ENST00000513944 DNMBPQ6XZF7 1577 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 NESP48681 1621 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 TRAF5O00463 557 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 SLC26A4O43511 780 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 GFRA1P56159 465 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 EIF4HQ15056 248 aaKnown RBP4.61□□□□□ -1.67
TNPO1-209ENST00000513944 WDR72Q3MJ13 1102 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 ZNF394Q53GI3 561 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 TRIM68Q6AZZ1 485 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 ZNF227Q86WZ6 799 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 SHCBP1Q8NEM2 672 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 CCDC140Q96MF4 163 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 MLST8Q9BVC4 326 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 OR10A2Q9H208 303 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 PCDHGB7Q9Y5F8 929 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 COX11Q9Y6N1 276 aa4.61□□□□□ -1.67
TNPO1-209ENST00000513944 MSCO60682 206 aa4.6□□□□□ -1.67
TNPO1-209ENST00000513944 CLK3P49761 638 aaKnown RBP4.6□□□□□ -1.67
TNPO1-209ENST00000513944 DBPQ10586 325 aaPredicted RBP4.6□□□□□ -1.67
TNPO1-209ENST00000513944 HABP4Q5JVS0 413 aaKnown RBP4.6□□□□□ -1.67
TNPO1-209ENST00000513944 SLC35F1Q5T1Q4 408 aa4.6□□□□□ -1.67
TNPO1-209ENST00000513944 OLFML1Q6UWY5 402 aa4.6□□□□□ -1.67
TNPO1-209ENST00000513944 ANKRD35Q8N283 1001 aa4.6□□□□□ -1.67
TNPO1-209ENST00000513944 OR14K1Q8NGZ2 314 aa4.6□□□□□ -1.67
TNPO1-209ENST00000513944 SLC25A43Q8WUT9 341 aaPredicted RBP4.6□□□□□ -1.67
TNPO1-209ENST00000513944 GZF1Q9H116 711 aaPredicted RBP4.6□□□□□ -1.67
TNPO1-209ENST00000513944 PRDM13Q9H4Q3 707 aa4.6□□□□□ -1.67
TNPO1-209ENST00000513944 KIF21BO75037 1637 aa4.6□□□□□ -1.67
TNPO1-209ENST00000513944 WDR97A6NE52 1622 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 NKRFO15226 690 aaKnown RBP eCLIP4.59□□□□□ -1.672e-7■□□□□ 9.5
TNPO1-209ENST00000513944 SOGA1O94964 1423 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 COL6A2P12110 1019 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 ZNF76P36508 570 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 KCNJ6P48051 423 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 MRE11P49959 708 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 IL13RA1P78552 427 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 STRIP1Q5VSL9 837 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 FGD5Q6ZNL6 1462 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 MICALCLQ6ZW33 695 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 KIF21AQ7Z4S6 1674 aa4.59□□□□□ -1.67
TNPO1-209ENST00000513944 TMEM87AQ8NBN3 555 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms