RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 BORAQ6PGQ7 559 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 C2CD5Q86YS7 1000 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 BRIP1Q9BX63 1249 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 SLC12A9Q9BXP2 914 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 TAOK3Q9H2K8 898 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 NARFQ9UHQ1 456 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 HACL1Q9UJ83 578 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 ABT1Q9ULW3 272 aaKnown RBP5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 INVSQ9Y283 1065 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 DLEC1Q9Y238 1755 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 NCAPD2Q15021 1401 aa5.05□□□□□ -1.6
PDLIM5-218ENST00000513341 ROCK2O75116 1388 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 NRXN2Q9P2S2 1712 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 FGF10O15520 208 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 RPL13P26373 211 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 PMLP29590 882 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 EPHX2P34913 555 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 CRKLP46109 303 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 CRTC3Q6UUV7 619 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 FAM124AQ86V42 546 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 NAT16Q8N8M0 369 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 SMARCC2Q8TAQ2 1214 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 CAPNS2Q96L46 248 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 NOX5Q96PH1 765 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 EHMT1Q9H9B1 1298 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 CD248Q9HCU0 757 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 DDX21Q9NR30 783 aaKnown RBP eCLIP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 SRP68Q9UHB9 627 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 ST6GALNAC2Q9UJ37 374 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 DBR1Q9UK59 544 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 IVNS1ABPQ9Y6Y0 642 aa5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 AFDNP55196 1824 aaKnown RBP5.04□□□□□ -1.6
PDLIM5-218ENST00000513341 WASHC2AQ641Q2 1341 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 GARTP22102 1010 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 RBM10P98175 930 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 AUHQ13825 339 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 AMOTQ4VCS5 1084 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 PLEKHO1Q53GL0 409 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 EAPPQ56P03 285 aaPredicted RBP5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 GPC2Q8N158 579 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 DNERQ8NFT8 737 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 KLC2Q9H0B6 622 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 KCNQ5Q9NR82 932 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 CASP8AP2Q9UKL3 1982 aa5.03□□□□□ -1.6
PDLIM5-218ENST00000513341 THSD7BQ9C0I4 1608 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 ADAMTSL1Q8N6G6 1762 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 MROH6A6NGR9 719 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 SMARCA5O60264 1052 aaPredicted RBP5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 POLR2BP30876 1174 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 CWF19L2Q2TBE0 894 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 OVOS1Q6IE37 1185 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 STYK1Q6J9G0 422 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 NLRC3Q7RTR2 1065 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 RELL1Q8IUW5 271 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 NETO2Q8NC67 525 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 ZNF622Q969S3 477 aaKnown RBP eCLIP5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 ATG4CQ96DT6 458 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 DUSP9Q99956 384 aaKnown RBP5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 SEMA4AQ9H3S1 761 aa5.02□□□□□ -1.61
PDLIM5-218ENST00000513341 A0A087WZG4 1122 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 ST20-MTHFSA0A0A6YYL1 179 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 FZD9O00144 591 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 MEIS1O00470 390 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 TNFRSF10CO14798 259 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 GSTM1P09488 218 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 NOP2P46087 812 aaKnown RBP5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 MTHFSP49914 203 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 SNAP47Q5SQN1 464 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 CST9Q5W186 159 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 CYP4F22Q6NT55 531 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 USP50Q70EL3 339 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 RTKN2Q8IZC4 609 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 GOLM1Q8NBJ4 401 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 ZBTB8AQ96BR9 441 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 MASTLQ96GX5 879 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 PEX11GQ96HA9 241 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 ZNF512BQ96KM6 892 aaPredicted RBP5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 CARD11Q9BXL7 1154 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 MKRN2Q9H000 416 aaKnown RBP5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 SAGE1Q9NXZ1 904 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 NUDT5Q9UKK9 219 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 FBXL21Q9UKT6 434 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 TESMINQ9Y4I5 508 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 ADAMTS7Q9UKP4 1686 aa5.01□□□□□ -1.61
PDLIM5-218ENST00000513341 TRPM7Q96QT4 1865 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 ZNF536O15090 1300 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 SOS1Q07889 1333 aaPredicted RBP5□□□□□ -1.61
PDLIM5-218ENST00000513341 C9orf118A6NHY6 69 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 TBC1D8O95759 1140 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 AMHP03971 560 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 CTSHP09668 335 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 SRGNP10124 158 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 CYP19A1P11511 503 aaPredicted RBP5□□□□□ -1.61
PDLIM5-218ENST00000513341 L1CAMP32004 1257 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 GBP2P32456 591 aaPredicted RBP5□□□□□ -1.61
PDLIM5-218ENST00000513341 THBS2P35442 1172 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 NOGQ13253 232 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 ICAM4Q14773 271 aa5□□□□□ -1.61
PDLIM5-218ENST00000513341 PKN2Q16513 984 aaKnown RBP5□□□□□ -1.61
PDLIM5-218ENST00000513341 CCDC93Q567U6 631 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms