RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ST20-MTHFSA0A0A6YYL1 179 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 TCRBV5S4A2TA0A5A2 114 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 CYP7B1O75881 506 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 FBXO21O94952 628 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 APOL3O95236 402 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 ENO2P09104 434 aaPredicted RBP5.61□□□□□ -1.51
HTT-210ENST00000512909 TMEM253P0C7T8 217 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 CYP2C8P10632 490 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 FAHP16930 419 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 BPIP17213 487 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 STAT5AP42229 794 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 CDKN1CP49918 316 aaPredicted RBP5.61□□□□□ -1.51
HTT-210ENST00000512909 YBX1P67809 324 aaKnown RBP5.61□□□□□ -1.51
HTT-210ENST00000512909 KCNN1Q92952 543 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 FERMT2Q96AC1 680 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 AHCYL2Q96HN2 611 aaKnown RBP5.61□□□□□ -1.51
HTT-210ENST00000512909 TUBGCP5Q96RT8 1024 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 SLC38A3Q99624 504 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 RNF38Q9H0F5 515 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 TCEAL9Q9UHQ7 104 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 B3GALT1Q9Y5Z6 326 aa5.61□□□□□ -1.51
HTT-210ENST00000512909 PEX10O60683 326 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 PAPLNO95428 1278 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 EFEMP2O95967 443 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 PDGFRBP09619 1106 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 ID4P47928 161 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 FNTBP49356 437 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 EPHA5P54756 1037 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 HERVK_113P62684 666 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 EXOSC10Q01780 885 aaKnown RBP5.6□□□□□ -1.51
HTT-210ENST00000512909 PRR23BQ6ZRT6 265 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 FRMD7Q6ZUT3 714 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 NOSTRINQ8IVI9 506 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 SH3RF2Q8TEC5 729 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 CLEC4DQ8WXI8 215 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 RPGRQ92834 1020 aaKnown RBP5.6□□□□□ -1.51
HTT-210ENST00000512909 CLIC6Q96NY7 704 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 WRNIP1Q96S55 665 aa5.6□□□□□ -1.51
HTT-210ENST00000512909 ELF4Q99607 663 aaPredicted RBP5.6□□□□□ -1.51
HTT-210ENST00000512909 H2AFY2Q9P0M6 372 aaPredicted RBP5.6□□□□□ -1.51
HTT-210ENST00000512909 UBA6A0AVT1 1052 aaPredicted RBP5.59□□□□□ -1.51
HTT-210ENST00000512909 PRAMEF22A3QJZ6 481 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 FAM90A27PA6NNH2 459 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 GOLGA8AA7E2F4 631 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 GOLGA8BA8MQT2 603 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 SEMA7AO75326 666 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 CT47B1P0C2W7 299 aaPredicted RBP5.59□□□□□ -1.51
HTT-210ENST00000512909 TAL1P17542 331 aaPredicted RBP5.59□□□□□ -1.51
HTT-210ENST00000512909 ITGB5P18084 799 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 ROM1Q03395 351 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
HTT-210ENST00000512909 CLUL1Q15846 466 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 TTC38Q5R3I4 469 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 BROXQ5VW32 411 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 PRAMEF18Q5VWM3 479 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 PRAMEF9Q5VWM5 478 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 TEPPQ6URK8 271 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 DPP8Q6V1X1 898 aaPredicted RBP5.59□□□□□ -1.51
HTT-210ENST00000512909 TTLL7Q6ZT98 887 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 ESPNLQ6ZVH7 1005 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 LDHDQ86WU2 507 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 DLG3Q92796 817 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 CCDC136Q96JN2 1154 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 TMEM209Q96SK2 561 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 ASB1Q9Y576 335 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 HCFC2Q9Y5Z7 792 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 MRFAP1Q9Y605 127 aa5.59□□□□□ -1.51
HTT-210ENST00000512909 TEX51A0A1B0GUA7 166 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 FAM83GA6ND36 823 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 KDM1AO60341 852 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 KATNA1O75449 491 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 EYA4O95677 639 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 ASGR2P07307 311 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 MMEP08473 750 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 ZBTB48P10074 688 aaPredicted RBP5.58□□□□□ -1.52
HTT-210ENST00000512909 PTGS1P23219 599 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 SDHAP31040 664 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 NCKAP1LP55160 1127 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 ODR4Q5SWX8 454 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 TMC5Q6UXY8 1006 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 PNMA8AQ86V59 439 aaPredicted RBP5.58□□□□□ -1.52
HTT-210ENST00000512909 MIB1Q86YT6 1006 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 PHYKPLQ8IUZ5 450 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 CNTD1Q8N815 330 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 ZNF610Q8N9Z0 462 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 COG1Q8WTW3 980 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 FAM126AQ9BYI3 521 aaPredicted RBP5.58□□□□□ -1.52
HTT-210ENST00000512909 USP36Q9P275 1121 aaKnown RBP5.58□□□□□ -1.52
HTT-210ENST00000512909 ARHGAP20Q9P2F6 1191 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 MSRAQ9UJ68 235 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 CUL7Q14999 1698 aa5.58□□□□□ -1.52
HTT-210ENST00000512909 ZNF503-AS2A6NEH8 195 aa5.57□□□□□ -1.52
HTT-210ENST00000512909 TCAF2A6NFQ2 919 aa5.57□□□□□ -1.52
HTT-210ENST00000512909 RFXAPO00287 272 aa5.57□□□□□ -1.52
HTT-210ENST00000512909 NFIBO00712 420 aa5.57□□□□□ -1.52
HTT-210ENST00000512909 CFBP00751 764 aa5.57□□□□□ -1.52
HTT-210ENST00000512909 C4BPAP04003 597 aaKnown RBP5.57□□□□□ -1.52
HTT-210ENST00000512909 DBPQ10586 325 aaPredicted RBP5.57□□□□□ -1.52
HTT-210ENST00000512909 EPHA7Q15375 998 aa5.57□□□□□ -1.52
HTT-210ENST00000512909 PKN1Q16512 942 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms