RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 HIBCHQ6NVY1 386 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-210ENST00000512756 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 TRIM4Q9C037 500 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 KIAA1586Q9HCI6 787 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 FGFR1OP2Q9NVK5 253 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 PLAAQ9Y263 795 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 TJP3O95049 919 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 HSPA8P11142 646 aaKnown RBP13.42□□□□□ -0.26
COL11A1-210ENST00000512756 GUCY2CP25092 1073 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 JAK3P52333 1124 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 CAV1Q03135 178 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 NR1H3Q13133 447 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 BBS9Q3SYG4 887 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-210ENST00000512756 PDZD8Q8NEN9 1154 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 DRC3Q9H069 523 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 K7ERI5 159 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 OSBPP22059 807 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 CTTNQ14247 550 aaKnown RBP13.42□□□□□ -0.26
COL11A1-210ENST00000512756 CYB5R4Q7L1T6 521 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 PCGF5Q86SE9 256 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 FAM20AQ96MK3 541 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 PRCPP42785 496 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 E2F5Q15329 346 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 RAD54LQ92698 747 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 RBM41Q96IZ5 413 aaKnown RBP13.42□□□□□ -0.26
COL11A1-210ENST00000512756 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
COL11A1-210ENST00000512756 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-210ENST00000512756 FAF1Q9UNN5 650 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-210ENST00000512756 PREX2Q70Z35 1606 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 PDE1CQ14123 709 aaPredicted RBP13.41□□□□□ -0.26
COL11A1-210ENST00000512756 DPP9Q86TI2 863 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 APOL6Q9BWW8 343 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 GJB4Q9NTQ9 266 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 PDXDC2PQ6P474 469 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 ANGPTL2Q9UKU9 493 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 GRID2IPA4D2P6 1211 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 DCTN3O75935 186 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 THOC5Q13769 683 aaKnown RBP13.41□□□□□ -0.26
COL11A1-210ENST00000512756 TTC13Q8NBP0 860 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 ZBED1O96006 694 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 NR3C1P04150 777 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 RPSAP08865 295 aaKnown RBP13.41□□□□□ -0.26
COL11A1-210ENST00000512756 ESRRAP11474 423 aaPredicted RBP13.41□□□□□ -0.26
COL11A1-210ENST00000512756 GPC5P78333 572 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 TRIP13Q15645 432 aaPredicted RBP13.41□□□□□ -0.26
COL11A1-210ENST00000512756 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
COL11A1-210ENST00000512756 LRRC53A6NM62 1247 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 KRT37O76014 449 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 SPARCL1Q14515 664 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 TBC1D10BQ4KMP7 808 aaPredicted RBP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 NUGGCQ68CJ6 796 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 KRT39Q6A163 491 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 SERPINI1Q99574 410 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 MSTO1Q9BUK6 570 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 SCOCQ9UIL1 159 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 ADCY10Q96PN6 1610 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 A0A1W2PQC6 194 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 SMIM24O75264 130 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 HNRNPH2P55795 449 aaKnown RBP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 ENAHQ8N8S7 591 aaPredicted RBP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 XXYLT1Q8NBI6 393 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 MCUQ8NE86 351 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 MCPH1Q8NEM0 835 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 RPF1Q9H9Y2 349 aaKnown RBP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 ANGPTL3Q9Y5C1 460 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 TET3O43151 1660 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 TYW5A2RUC4 315 aaKnown RBP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 TOM1L1O75674 476 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 PLS3P13797 630 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 NPR1P16066 1061 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 ESRRGP62508 458 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 BIRC2Q13490 618 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 LLGL1Q15334 1064 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 PPWD1Q96BP3 646 aaKnown RBP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 NUDCD1Q96RS6 583 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 TRIM49BA6NDI0 452 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 MAP3K7O43318 606 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 PPFIA2O75334 1257 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL11A1-210ENST00000512756 CD58P19256 250 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 KIF22Q14807 665 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 GDAP1Q8TB36 358 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 TTC1Q99614 292 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 EDEM3Q9BZQ6 932 aa13.4□□□□□ -0.26
COL11A1-210ENST00000512756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 ATP5HO75947 161 aa13.39□□□□□ -0.27
COL11A1-210ENST00000512756 HOXA13P31271 388 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-210ENST00000512756 GRM4Q14833 912 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms