RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FBXO11Q86XK2 927 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 ADGRF4Q8IZF3 695 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 RMDN3Q96TC7 470 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 OXCT2Q9BYC2 517 aaPredicted RBP8.36□□□□□ -1.07
USP46-208ENST00000512656 NIFKQ9BYG3 293 aaKnown RBP8.36□□□□□ -1.07
USP46-208ENST00000512656 WNT8AQ9H1J5 351 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 PRDM12Q9H4Q4 367 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 TRMT13Q9NUP7 481 aaKnown RBP8.36□□□□□ -1.07
USP46-208ENST00000512656 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
USP46-208ENST00000512656 GDF2Q9UK05 429 aaPredicted RBP8.36□□□□□ -1.07
USP46-208ENST00000512656 NOD1Q9Y239 953 aa8.36□□□□□ -1.07
USP46-208ENST00000512656 LRRC37A2A6NM11 1700 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 B4E1Z4 1266 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 GH1P01241 217 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 IGHDP01880 384 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 CYP2C9P11712 490 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 ATP2A2P16615 1042 aaKnown RBP8.35□□□□□ -1.07
USP46-208ENST00000512656 TRDNQ13061 729 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 IFIT1BQ5T764 474 aaKnown RBP8.35□□□□□ -1.07
USP46-208ENST00000512656 ARHGEF16Q5VV41 709 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 FIGNL1Q6PIW4 674 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 ENAHQ8N8S7 591 aaPredicted RBP8.35□□□□□ -1.07
USP46-208ENST00000512656 SYTL5Q8TDW5 730 aaPredicted RBP8.35□□□□□ -1.07
USP46-208ENST00000512656 SCLYQ96I15 445 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 YTHDC1Q96MU7 727 aaKnown RBP8.35□□□□□ -1.07
USP46-208ENST00000512656 NKX2-4Q9H2Z4 354 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 VAT1LQ9HCJ6 419 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 NDFIP2Q9NV92 336 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 MAP3K20Q9NYL2 800 aaKnown RBP8.35□□□□□ -1.07
USP46-208ENST00000512656 ZSWIM5Q9P217 1185 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
USP46-208ENST00000512656 SPTBN5Q9NRC6 3674 aaKnown RBP8.35□□□□□ -1.07
USP46-208ENST00000512656 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 EIF3JO75822 258 aaKnown RBP8.34□□□□□ -1.07
USP46-208ENST00000512656 CASTP20810 708 aaKnown RBP8.34□□□□□ -1.07
USP46-208ENST00000512656 IGFBP4P22692 258 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 CHMP4BP1P59074 171 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 DGKDQ16760 1214 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 QRICH1Q2TAL8 776 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 TMEM67Q5HYA8 995 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 CCDC62Q6P9F0 684 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 KCNV1Q6PIU1 500 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 SEPT14Q6ZU15 432 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 DEFB128Q7Z7B8 93 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 NLRP8Q86W28 1048 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 SAMD3Q8N6K7 520 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 EXOC6Q8TAG9 804 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 CAGE1Q8TC20 777 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 PHOSPHO2Q8TCD6 241 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 AFG1LQ8WV93 481 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 ATXN2LQ8WWM7 1075 aaKnown RBP8.34□□□□□ -1.07
USP46-208ENST00000512656 RUFY2Q8WXA3 655 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 PPM1EQ8WY54 764 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 COPS5Q92905 334 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 TAAR1Q96RJ0 339 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 SLC9A7Q96T83 725 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 AMNQ9BXJ7 453 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 FTOQ9C0B1 505 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP46-208ENST00000512656 CPVLQ9H3G5 476 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 RUBCNLQ9H714 662 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 JMJD4Q9H9V9 463 aa8.34□□□□□ -1.07
USP46-208ENST00000512656 ERICH2A1L162 156 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 KLRF2D3W0D1 207 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 CDK2AP1O14519 115 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 ZBTB5O15062 677 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 BAIAP3O94812 1187 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 ARIH2O95376 493 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
USP46-208ENST00000512656 CFBP00751 764 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 MMP3P08254 477 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 IQCF3P0C7M6 154 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 KCNJ6P48051 423 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 RABGGTBP53611 331 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 ARHGAP1Q07960 439 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 LAMC2Q13753 1193 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 SART3Q15020 963 aaKnown RBP8.33□□□□□ -1.08
USP46-208ENST00000512656 PTGISQ16647 500 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 EML3Q32P44 896 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 CHST3Q7LGC8 479 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 SESTD1Q86VW0 696 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 GOLGA6L1Q8N7Z2 621 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 C7orf31Q8N865 590 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 AFAP1L1Q8TED9 768 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 TBC1D5Q92609 795 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 KATNAL1Q9BW62 490 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 ALG2Q9H553 416 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 THEGQ9P2T0 379 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 YBX2Q9Y2T7 364 aaKnown RBP8.33□□□□□ -1.08
USP46-208ENST00000512656 MRVI1Q9Y6F6 885 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 LCTP09848 1927 aa8.33□□□□□ -1.08
USP46-208ENST00000512656 SCN10AQ9Y5Y9 1956 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 TMEM229AB2RXF0 380 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 STAU1O95793 577 aaKnown RBP8.32□□□□□ -1.08
USP46-208ENST00000512656 EIF2AK2P19525 551 aaKnown RBP8.32□□□□□ -1.08
USP46-208ENST00000512656 PLA2G4AP47712 749 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 HSD17B4P51659 736 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 MRPS5P82675 430 aaKnown RBP8.32□□□□□ -1.08
USP46-208ENST00000512656 ADGRE1Q14246 886 aa8.32□□□□□ -1.08
USP46-208ENST00000512656 LY6KQ17RY6 165 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms