RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ADCY5O95622 1261 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ATF2P15336 505 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 CES1P23141 567 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 STX2P32856 288 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 RFX3P48380 749 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 DNAJC10Q8IXB1 793 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ACCSQ96QU6 501 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 NCKAP1Q9Y2A7 1128 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ASB14A6NK59 587 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 MMP10P09238 476 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 BRAFP15056 766 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 CD58P19256 250 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ALDH7A1P49419 539 aaKnown RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 RPS6KA1Q15418 735 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 SEL1LQ9UBV2 794 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 GPN3Q9UHW5 284 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 POLA1P09884 1462 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 SNUPNO95149 360 aaKnown RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 RHOXF2BP0C7M4 288 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ANGPT1Q15389 498 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 PREPLQ4J6C6 727 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 RHOXF2Q9BQY4 288 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 C2CD2LO14523 706 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 E2F6O75461 281 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 HIST1H2AGP0C0S8 130 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 RAG1P15918 1043 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 HIST1H2ADP20671 130 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 CSE1LP55060 971 aaKnown RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 PAK1Q13153 545 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 CWF19L2Q2TBE0 894 aaKnown RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 DEPDC1BQ8WUY9 529 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 HIST1H2AHQ96KK5 128 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ZNF512Q96ME7 567 aaPredicted RBP9.58□□□□□ -0.88
VCAN-208ENST00000512590 HIST1H2AJQ99878 128 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 H2AFJQ9BTM1 129 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 TRIM15Q9C019 465 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 POLKQ9UBT6 870 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 ATP6V1HQ9UI12 483 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 DTNAQ9Y4J8 743 aa9.58□□□□□ -0.88
VCAN-208ENST00000512590 GOLGA8RI6L899 631 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 EYA2O00167 538 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 SNAPC2Q13487 334 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 EXOC3L4Q17RC7 722 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 ZNF394Q53GI3 561 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 CES5AQ6NT32 575 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 FAM160B2Q86V87 743 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 RNASE11Q8TAA1 199 aaKnown RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 ARFGAP3Q9NP61 516 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 PSMD12O00232 456 aaPredicted RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 BUB1BO60566 1050 aaPredicted RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 P4HBP07237 508 aaKnown RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 AKAP5P24588 427 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 ALFQ53S48 1182 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 HLA-DQA1Q5Y7H0 255 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 USP17L2Q6R6M4 530 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 KCTD17Q8N5Z5 321 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 ARRDC4Q8NCT1 418 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 TMEM169Q96HH4 297 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 RPS6KB2Q9UBS0 482 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 GTF2A1LQ9UNN4 478 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 UBA6A0AVT1 1052 aaPredicted RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 C21orf59P57076 290 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 PCGF5Q86SE9 256 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 GLT1D1Q96MS3 346 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 KLHL25Q9H0H3 589 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 RAB17Q9H0T7 212 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 HPS4Q9NQG7 708 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 TYW1Q9NV66 732 aaKnown RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 PCDHB12Q9Y5F1 795 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 PHLPP2Q6ZVD8 1323 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 ZNF532Q9HCE3 1301 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 EEF1B2P24534 225 aaKnown RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 IFNAR2P48551 515 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 EZH2Q15910 746 aaKnown RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 TRIM11Q96F44 468 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 MSTO1Q9BUK6 570 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 ANAPC2Q9UJX6 822 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 IFT140Q96RY7 1462 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 LZTS3O60299 673 aaPredicted RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 MYBP10242 640 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 ALDH18A1P54886 795 aaKnown RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 CCDC85BQ15834 202 aaPredicted RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 CDO1Q16878 200 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 PHACTR4Q8IZ21 702 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 SPIRE2Q8WWL2 714 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 KIF2CQ99661 725 aa9.57□□□□□ -0.88
VCAN-208ENST00000512590 COPS7BQ9H9Q2 264 aaPredicted RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 NCOA5Q9HCD5 579 aaKnown RBP9.57□□□□□ -0.88
VCAN-208ENST00000512590 NCKAP1LP55160 1127 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 YWHAZP63104 245 aaKnown RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 DYNLT1P63172 113 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 DNAJC24Q6P3W2 148 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 EFHD1Q9BUP0 239 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 CALN1Q9BXU9 219 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 BABAM1Q9NWV8 329 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 H2AFY2Q9P0M6 372 aaPredicted RBP9.56□□□□□ -0.88
VCAN-208ENST00000512590 MID2Q9UJV3 735 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 FBXL5Q9UKA1 691 aa9.56□□□□□ -0.88
VCAN-208ENST00000512590 KRT1P04264 644 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms