RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 MXD3Q9BW11 206 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 DAB1O75553 588 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 PHBP35232 272 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 ATP6V1E1P36543 226 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 PSMD7P51665 324 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 SEPT2Q15019 361 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 HIBCHQ6NVY1 386 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-209ENST00000512055 HDDC2Q7Z4H3 204 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 ENGASEQ8NFI3 743 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 KIFAP3Q92845 792 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 NRBF2Q96F24 287 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 MAK16Q9BXY0 300 aaKnown RBP11.72□□□□□ -0.53
CPNE4-209ENST00000512055 EIF4E1BA6NMX2 242 aaKnown RBP11.72□□□□□ -0.53
CPNE4-209ENST00000512055 TTC4O95801 387 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 NR2F2P24468 414 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 RXRBP28702 533 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 TOGARAM2Q6ZUX3 1019 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 TXNRD3Q86VQ6 643 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 TRPC1P48995 793 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 ATP2C1P98194 919 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-209ENST00000512055 LGSNQ5TDP6 509 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 SYDE2Q5VT97 1194 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 TEX2Q8IWB9 1127 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 ZFYVE1Q9HBF4 777 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
CPNE4-209ENST00000512055 GOLGA8KD6RF30 607 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 GCFC2P16383 781 aaKnown RBP11.71□□□□□ -0.53
CPNE4-209ENST00000512055 KCNA4P22459 653 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 BRD3Q15059 726 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 CTAGE3PQ8IX95 158 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 PEAK1Q9H792 1746 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 WTIPA6NIX2 430 aaPredicted RBP11.71□□□□□ -0.53
CPNE4-209ENST00000512055 SART1O43290 800 aaKnown RBP11.71□□□□□ -0.53
CPNE4-209ENST00000512055 NBNO60934 754 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 ABCB4P21439 1286 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 TLK2Q86UE8 772 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 OSBPL5Q9H0X9 879 aaPredicted RBP11.71□□□□□ -0.53
CPNE4-209ENST00000512055 CNGB3Q9NQW8 809 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 UTP6Q9NYH9 597 aaKnown RBP11.71□□□□□ -0.53
CPNE4-209ENST00000512055 ANGPTL3Q9Y5C1 460 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 COPG1Q9Y678 874 aaKnown RBP11.71□□□□□ -0.53
CPNE4-209ENST00000512055 JCADQ9P266 1359 aa11.71□□□□□ -0.53
CPNE4-209ENST00000512055 PIK3C2AO00443 1686 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 hCG_1984214I3L0E3 225 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.54
CPNE4-209ENST00000512055 RCN2Q14257 317 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 AOC3Q16853 763 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 NLRX1Q86UT6 975 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.54
CPNE4-209ENST00000512055 U2AF1L4Q8WU68 220 aaKnown RBP11.71□□□□□ -0.54
CPNE4-209ENST00000512055 ANO3Q9BYT9 981 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 STAT2P52630 851 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.54
CPNE4-209ENST00000512055 CLIC2O15247 247 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 TDP2O95551 362 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 MYL1P05976 194 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 FAM102BQ5T8I3 360 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ARHGEF16Q5VV41 709 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 BTN2A1Q7KYR7 527 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 FAM186BQ8IYM0 893 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 CCDC197Q8NCU1 140 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 TRIM58Q8NG06 486 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 PPP4R1Q8TF05 950 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 DAGLAQ9Y4D2 1042 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ANKRD65E5RJM6 399 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 MYO1CO00159 1063 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 PDHA1P08559 390 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 PLA2G4BP0C869 781 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 RASSF7Q02833 373 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 MSANTD4Q8NCY6 345 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 DIABLOQ9NR28 239 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 BCL9O00512 1426 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 K7ENM7 598 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ZBTB5O15062 677 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 MFAP3LO75121 409 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 SEC31AO94979 1220 aaKnown RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 RPS6KA1Q15418 735 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ZC3H18Q86VM9 953 aaKnown RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ANKRD35Q8N283 1001 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 FAM167BQ9BTA0 163 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 TEKT3Q9BXF9 490 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 WARS2Q9UGM6 360 aaKnown RBP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 SFMBT1Q9UHJ3 866 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 CDC23Q9UJX2 597 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 PCDHA6Q9UN73 950 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPNE4-209ENST00000512055 PCDHA8Q9Y5H6 950 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 FLT1P17948 1338 aa11.7□□□□□ -0.54
CPNE4-209ENST00000512055 ENO4A6NNW6 628 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms