RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 SMARCAD1Q9H4L7 1026 aa15.21■□□□□ 0.03
POLR2J3-216ENST00000511773 TSHZ2Q9NRE2 1034 aa15.21■□□□□ 0.03
POLR2J3-216ENST00000511773 HCSTQ9UBK5 93 aa15.21■□□□□ 0.03
POLR2J3-216ENST00000511773 PCDHB12Q9Y5F1 795 aa15.21■□□□□ 0.03
POLR2J3-216ENST00000511773 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
POLR2J3-216ENST00000511773 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 IFIT3O14879 490 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 INSRRP14616 1297 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 TECP42680 631 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 ERVFC1P60507 584 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 PLPP4Q5VZY2 271 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 B4GALNT3Q6L9W6 998 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 XRRA1Q6P2D8 792 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 ASCL5Q7RTU5 278 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 THNSL1Q8IYQ7 743 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 ATP8B4Q8TF62 1192 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 TRAPPC12Q8WVT3 735 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 TMX1Q9H3N1 280 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 TRPC6Q9Y210 931 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 VPS13AQ96RL7 3174 aa15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 FNDC1Q4ZHG4 1894 aaPredicted RBP15.2■□□□□ 0.02
POLR2J3-216ENST00000511773 IGSF9BQ9UPX0 1349 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 FGF18O76093 207 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 SRGAP2BP0DMP2 458 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 FOXK2Q01167 660 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 TRDNQ13061 729 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 HDAC1Q13547 482 aaPredicted RBP15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 GPRASP2Q96D09 838 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 RIPOR3Q96MK2 946 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 CDCA3Q99618 268 aaPredicted RBP15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 CELF4Q9BZC1 486 aaKnown RBP15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 GINS2Q9Y248 185 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 PCDHB7Q9Y5E2 793 aa15.19■□□□□ 0.02
POLR2J3-216ENST00000511773 ERICH2A1L162 156 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 RRN3P2A6NIE6 340 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 HIP1O00291 1037 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 MEIS2O14770 477 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 MGEA5O60502 916 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 RPLP2P05387 115 aaKnown RBP15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 ITGB5P18084 799 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 SARSP49591 514 aaKnown RBP15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 UBE3AQ05086 875 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 NFX1Q12986 1120 aaKnown RBP15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 MTMR1Q13613 665 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 ANKRD54Q6NXT1 300 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 COLGALT1Q8NBJ5 622 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 KREMEN2Q8NCW0 462 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 CDHR1Q96JP9 859 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 S1PR5Q9H228 398 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 IL25Q9H293 177 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 AZI2Q9H6S1 392 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 CDH22Q9UJ99 828 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 SQORQ9Y6N5 450 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 GVINP1Q7Z2Y8 2422 aa15.18■□□□□ 0.02
POLR2J3-216ENST00000511773 FSD2A1L4K1 749 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 DENND3A2RUS2 1198 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 PRR23AA6NEV1 266 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 KRT76Q01546 638 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 TROAPQ12815 778 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 WTAPQ15007 396 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 FAM102BQ5T8I3 360 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 CATIPQ7Z7H3 387 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 RRP36Q96EU6 259 aaKnown RBP15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 PCYT2Q99447 389 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 SMOC2Q9H3U7 446 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 ENTPD7Q9NQZ7 604 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 SEC63Q9UGP8 760 aaKnown RBP15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 PCDHA2Q9Y5H9 948 aa15.17■□□□□ 0.02
POLR2J3-216ENST00000511773 PROB1E7EW31 1015 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 PIK3CDO00329 1044 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 FSCN2O14926 492 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 FGFR1P11362 822 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 MTMR3Q13615 1198 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 PLCB4Q15147 1175 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 UBE2SQ16763 222 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 SYCE2Q6PIF2 218 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 TMEM105Q8N8V8 129 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 ADAM2Q99965 735 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 TCF25Q9BQ70 676 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 MYL10Q9BUA6 226 aa15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 JPH1Q9HDC5 661 aaPredicted RBP15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 TYW1Q9NV66 732 aaKnown RBP15.16■□□□□ 0.02
POLR2J3-216ENST00000511773 MYO10Q9HD67 2058 aa15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 BRD1O95696 1058 aa15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 NUBP1P53384 320 aa15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 SART3Q15020 963 aaKnown RBP15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 PDE12Q6L8Q7 609 aaKnown RBP15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 PPP1R16BQ96T49 567 aa15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 ERVK-5Q9HDB9 667 aa15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 UBIAD1Q9Y5Z9 338 aa15.15■□□□□ 0.02
POLR2J3-216ENST00000511773 HIDE1A8MVS5 230 aa15.14■□□□□ 0.01
POLR2J3-216ENST00000511773 C2CD4DB7Z1M9 353 aa15.14■□□□□ 0.01
POLR2J3-216ENST00000511773 RPS6KA5O75582 802 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms