RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 GCOM1H8Y6P7 765 aaPredicted RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 EIF3JO75822 258 aaKnown RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 RGS20O76081 388 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 GH1P01241 217 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 POLR2MP0CAP2 368 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 CSF2RAP15509 400 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 TRAF1Q13077 416 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 CLN3Q13286 438 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 PGM5Q15124 567 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 ECM1Q16610 540 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 ADCK5Q3MIX3 580 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 BRDTQ58F21 947 aaPredicted RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 FAM47CQ5HY64 1035 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 C16orf59Q7L2K0 433 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 MICU3Q86XE3 530 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 SAMD3Q8N6K7 520 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 ITPKCQ96DU7 683 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 RRP36Q96EU6 259 aaKnown RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 RNPC3Q96LT9 517 aaKnown RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDPN-209ENST00000510906 MKNK1Q9BUB5 465 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 ALDH8A1Q9H2A2 487 aaPredicted RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 HIPK3Q9H422 1215 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 RAB6BQ9NRW1 208 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 TRMT13Q9NUP7 481 aaKnown RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 MTMR10Q9NXD2 777 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 TOR4AQ9NXH8 423 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 MAP3K20Q9NYL2 800 aaKnown RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 DDX41Q9UJV9 622 aaKnown RBP9.92□□□□□ -0.82
PDPN-209ENST00000510906 SLC12A7Q9Y666 1083 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 MRVI1Q9Y6F6 885 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 DNAH12Q6ZR08 3092 aa9.92□□□□□ -0.82
PDPN-209ENST00000510906 hCG_1642624A0A1W2PR95 340 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 SORBS3O60504 671 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 MMP3P08254 477 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 CALM1P0DP23 149 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 CALM2P0DP24 149 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 CALM3P0DP25 149 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 ACRP10323 421 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 CYP2C9P11712 490 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 SMARCA1P28370 1054 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 GNAQP50148 359 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 CCL23P55773 120 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 CHMP4BP1P59074 171 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 EXOSC10Q01780 885 aaKnown RBP9.91□□□□□ -0.82
PDPN-209ENST00000510906 ZNF211Q13398 564 aaPredicted RBP9.91□□□□□ -0.82
PDPN-209ENST00000510906 PPIGQ13427 754 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDPN-209ENST00000510906 TMTC3Q6ZXV5 915 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 VSIG10LQ86VR7 867 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 SGMS1Q86VZ5 419 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 LZTS2Q9BRK4 669 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 NOC4LQ9BVI4 516 aaKnown RBP9.91□□□□□ -0.82
PDPN-209ENST00000510906 SEZ6LQ9BYH1 1024 aa9.91□□□□□ -0.82
PDPN-209ENST00000510906 SEC63Q9UGP8 760 aaKnown RBP9.91□□□□□ -0.82
PDPN-209ENST00000510906 DNMT3AQ9Y6K1 912 aaPredicted RBP9.91□□□□□ -0.82
PDPN-209ENST00000510906 BAZ2BQ9UIF8 2168 aaKnown RBP9.91□□□□□ -0.82
PDPN-209ENST00000510906 H3BRB1 525 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 J3QL48 77 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 KPNA6O60684 536 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 CPA1P15085 419 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 CCND2P30279 289 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 SMAD3P84022 425 aaKnown RBP9.9□□□□□ -0.82
PDPN-209ENST00000510906 CBLBQ13191 982 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 TMEM240Q5SV17 173 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 FAM109BQ6ICB4 259 aaPredicted RBP9.9□□□□□ -0.82
PDPN-209ENST00000510906 APOA5Q6Q788 366 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 USP17L6PQ6QN14 398 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 DHX32Q7L7V1 743 aaKnown RBP9.9□□□□□ -0.82
PDPN-209ENST00000510906 SLC9A9Q8IVB4 645 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 ZNF295-AS1Q8N0V1 137 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 FANCBQ8NB91 859 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 KAT2BQ92831 832 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 FAM161BQ96MY7 647 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 WNT8AQ9H1J5 351 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 TUT1Q9H6E5 874 aaKnown RBP9.9□□□□□ -0.82
PDPN-209ENST00000510906 BRPF3Q9ULD4 1205 aa9.9□□□□□ -0.82
PDPN-209ENST00000510906 FRMPD4Q14CM0 1322 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 A0A1W2PRU2 124 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 MEIS2O14770 477 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 GGPS1O95749 300 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 ABL1P00519 1130 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 NEFLP07196 543 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 SUPT20HL2P0C7V6 817 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 TIMP2P16035 220 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 CASTP20810 708 aaKnown RBP9.89□□□□□ -0.83
PDPN-209ENST00000510906 UBA1P22314 1058 aaKnown RBP9.89□□□□□ -0.83
PDPN-209ENST00000510906 MRPS9P82933 396 aaKnown RBP9.89□□□□□ -0.83
PDPN-209ENST00000510906 SP2Q02086 613 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 LAMC2Q13753 1193 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 KRT32Q14532 448 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 NFRKBQ6P4R8 1299 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 SYNE3Q6ZMZ3 975 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 DHX37Q8IY37 1157 aaKnown RBP9.89□□□□□ -0.83
PDPN-209ENST00000510906 SMARCC2Q8TAQ2 1214 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 VWCEQ96DN2 955 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 SCLYQ96I15 445 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms