RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 KIAA1024Q9UPX6 916 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 KLRC1P26715 233 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 GABPAQ06546 454 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 PDGFCQ9NRA1 345 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 PRG3Q9Y2Y8 225 aaPredicted RBP13.76□□□□□ -0.21
LIN54-210ENST00000510877 K7ENM7 598 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 TMEM191BP0C7N4 346 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 ITGA4P13612 1032 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 USP11P51784 963 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
LIN54-210ENST00000510877 GPAT2Q6NUI2 795 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 DHX58Q96C10 678 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 GRIK4Q16099 956 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
LIN54-210ENST00000510877 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■■■■ 154
LIN54-210ENST00000510877 HDAC6Q9UBN7 1215 aa13.76□□□□□ -0.21
LIN54-210ENST00000510877 LOC102724159A0A0B4J2E5 919 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 URODP06132 367 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 SMARCA1P28370 1054 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 PWP2Q15269 919 aaKnown RBP13.75□□□□□ -0.21
LIN54-210ENST00000510877 MB21D2Q8IYB1 491 aaPredicted RBP13.75□□□□□ -0.21
LIN54-210ENST00000510877 PPP1R13LQ8WUF5 828 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 ZNF333Q96JL9 665 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 KIAA0754O94854 1291 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 GCNT3O95395 438 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 TNNC2P02585 160 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 RCAN1P53805 252 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 FILIP1LQ4L180 1135 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 NFRKBQ6P4R8 1299 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 LRRC8DQ7L1W4 858 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 DEFB123Q8N688 67 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 RNF214Q8ND24 703 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 NEK9Q8TD19 979 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 RIPK3Q9Y572 518 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 ERICH4A6NGS2 130 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 MEIS1O00470 390 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 TNNI1P19237 187 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 TRIM32Q13049 653 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 GPBP1Q86WP2 473 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 SRBD1Q8N5C6 995 aaKnown RBP13.75□□□□□ -0.21
LIN54-210ENST00000510877 FBXO22Q8NEZ5 403 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 GOLGA1Q92805 767 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 EXOC4Q96A65 974 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 SCLYQ96I15 445 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 MMS19Q96T76 1030 aa13.75□□□□□ -0.21
LIN54-210ENST00000510877 FAM155AB1AL88 458 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 C2CD2LO14523 706 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
LIN54-210ENST00000510877 P4HA1P13674 534 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 INSRRP14616 1297 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 KIZQ2M2Z5 673 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 LRRC71Q8N4P6 559 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 FRMD4BQ9Y2L6 1034 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 RPL13P26373 211 aaKnown RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 GTF2A1P52655 376 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 KANK3Q6NY19 840 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 TRPV6Q9H1D0 765 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 LGALS2P05162 132 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 ARID5AQ03989 594 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 POSTNQ15063 836 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 PGM5Q15124 567 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 AXDND1Q5T1B0 1012 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 COLEC11Q9BWP8 271 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
LIN54-210ENST00000510877 ASAP2O43150 1006 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 TAL1P17542 331 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 DNAJB2P25686 324 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 IFRD2Q12894 506 aaPredicted RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 VEPH1Q14D04 833 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 DYMQ7RTS9 669 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 DNAJC5GQ8N7S2 189 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 TIFAQ96CG3 184 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 FTHL17Q9BXU8 183 aa13.74□□□□□ -0.21
LIN54-210ENST00000510877 NAT10Q9H0A0 1025 aaKnown RBP13.74□□□□□ -0.21
LIN54-210ENST00000510877 KIF2AO00139 706 aaPredicted RBP13.73□□□□□ -0.21
LIN54-210ENST00000510877 CPB1P15086 417 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 NRCAMQ92823 1304 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 PFKFB2O60825 505 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 MAP3K14Q99558 947 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 GDAQ9Y2T3 454 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 PFKMP08237 780 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 PRKCEQ02156 737 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
LIN54-210ENST00000510877 KMT5BQ4FZB7 885 aa13.73□□□□□ -0.21
LIN54-210ENST00000510877 WDR44Q5JSH3 913 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms