RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 CYP2C19P33261 490 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 SREBF2Q12772 1141 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 TMEM266Q2M3C6 531 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 Q3C1V9 767 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 SLC30A10Q6XR72 485 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 TRAPPC11Q7Z392 1133 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 RAB34Q9BZG1 259 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 LRRC27Q9C0I9 530 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 EIF3CLB5ME19 914 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 PES1O00541 588 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 FGFR1OPO95684 399 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 SLC25A27O95847 323 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 SREBF1P36956 1147 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 GCLCP48506 637 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 ERVK-9P63128 1117 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 TBC1D8BQ0IIM8 1120 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 GPS2Q13227 327 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 BAATQ14032 418 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 BEND6Q5SZJ8 279 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 FKBP15Q5T1M5 1219 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 ANKRD40Q6AI12 368 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 CENPPQ6IPU0 288 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 UNC13DQ70J99 1090 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 SV2BQ7L1I2 683 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 IFNL1Q8IU54 200 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 ANKRD13CQ8N6S4 541 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 SYTL5Q8TDW5 730 aaPredicted RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 EIF3CQ99613 913 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 EHMT1Q9H9B1 1298 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 ZCCHC17Q9NP64 241 aaKnown RBP17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 COL20A1Q9P218 1284 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 FBXO40Q9UH90 709 aa17.74■□□□□ 0.43
SQSTM1-213ENST00000510187 KRT86O43790 486 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 IPO7O95373 1038 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 ERCC3P19447 782 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 TRIM21P19474 475 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 OAS2P29728 719 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 COPB2P35606 906 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 TECP42680 631 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 MTIF2P46199 727 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 USP11P51784 963 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 ARHGAP4P98171 946 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 STK4Q13043 487 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 PDIA5Q14554 519 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 CALCRLQ16602 461 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 DEFB115Q30KQ5 88 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 PAPD7Q5XG87 772 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 HDXQ7Z353 690 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 GPRC5AQ8NFJ5 357 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 RPGRIP1Q96KN7 1286 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 ZSWIM4Q9H7M6 989 aa17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 A1CFQ9NQ94 594 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-213ENST00000510187 ANO9A1A5B4 782 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 RASSF10A6NK89 507 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 EDIL3O43854 480 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 TDP2O95551 362 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 ABL1P00519 1130 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 GRB10Q13322 594 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 MIIPQ5JXC2 388 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 ANKRD35Q8N283 1001 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 CRYGNQ8WXF5 182 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 ZIC5Q96T25 663 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 NOC4LQ9BVI4 516 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 TSGA10Q9BZW7 698 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 GUCA1BQ9UMX6 200 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 EIF3JO75822 258 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 MCM3P25205 808 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 HNRNPH3P31942 346 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 CKAP4Q07065 602 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 TAF1CQ15572 869 aaPredicted RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 CCDC122Q5T0U0 273 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 PPP4R3AQ6IN85 833 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 KIAA1328Q86T90 577 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 GUF1Q8N442 669 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 KIAA0895Q8NCT3 520 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 JAKMIP2Q96AA8 810 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 PNKPQ96T60 521 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 NAP1L4Q99733 375 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 MAF1Q9H063 256 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 CYP39A1Q9NYL5 469 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 LRWD1Q9UFC0 647 aa17.72■□□□□ 0.43
SQSTM1-213ENST00000510187 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 UBXN2AP68543 259 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 CCNA1P78396 465 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 LRRC63Q05C16 580 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 PSMD2Q13200 908 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 NOGQ13253 232 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 CDK5RAP3Q96JB5 506 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 CAPNS2Q96L46 248 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 PURBQ96QR8 312 aaKnown RBP17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 TAAR1Q96RJ0 339 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 MROH8Q9H579 483 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 BLOC1S4Q9NUP1 217 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 MORF4L1Q9UBU8 362 aa17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 DDX25Q9UHL0 483 aaKnown RBP17.71■□□□□ 0.43
SQSTM1-213ENST00000510187 PFASO15067 1338 aa17.7■□□□□ 0.42
SQSTM1-213ENST00000510187 SLC26A4O43511 780 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms