RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ACTL7BQ9Y614 415 aa6.08□□□□□ -1.44
NEK1-204ENST00000509912 DNAJC25-GNG10A0A024R161 153 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 KRBA1A5PL33 1030 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 VSTM5A8MXK1 200 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 ARNTLO00327 626 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 GLRX3O76003 335 aaKnown RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 ADCYAP1R1P41586 468 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 ERVK-24P63145 666 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 NBPF12Q5TAG4 269 aaPredicted RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 PPP1R13LQ8WUF5 828 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 TMX4Q9H1E5 349 aaPredicted RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 MAPRE3Q9UPY8 281 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 SLC45A1Q9Y2W3 748 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 TCRBV16S1A1N1A0A5B0 115 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 PRAMEF22A3QJZ6 481 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 NOP56O00567 594 aaKnown RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 GPR39O43194 453 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 SOD2P04179 222 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 MYBL2P10244 700 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 HSPA8P11142 646 aaKnown RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 ADH5P11766 374 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 IL1R1P14778 569 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 IFNGR1P15260 489 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 ASPAP45381 313 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 TM4SF4P48230 202 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 GUCY1A3Q02108 690 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 SCRN1Q12765 414 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 CNGB1Q14028 1251 aaPredicted RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 COL9A3Q14050 684 aaPredicted RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 SUZ12Q15022 739 aaKnown RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 DEFB115Q30KQ5 88 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 RABL6Q3YEC7 729 aaPredicted RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 SUSD4Q5VX71 490 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 CRTC3Q6UUV7 619 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 MCM10Q7L590 875 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.07□□□□□ -1.44
NEK1-204ENST00000509912 MRPL41Q8IXM3 137 aaKnown RBP6.07□□□□□ -1.44
NEK1-204ENST00000509912 CHPFQ8IZ52 775 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 CNTROBQ8N137 903 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 SYNPOQ8N3V7 929 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 IGSF22Q8N9C0 903 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 WNK4Q96J92 1243 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 PRDM16Q9HAZ2 1276 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 FAM50BQ9Y247 325 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 ZNF804BA4D1E1 1349 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 ABCC4O15439 1325 aa6.07□□□□□ -1.44
NEK1-204ENST00000509912 SHISA3A0PJX4 238 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 WASH4PA8MWX3 477 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 FNDC3BQ53EP0 1204 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 RPGRQ92834 1020 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 PIDD1Q9HB75 910 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 MAGEC2Q9UBF1 373 aaPredicted RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 ZBTB21Q9ULJ3 1066 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 WDR33Q9C0J8 1336 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 FANCGO15287 622 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 PPM1BO75688 479 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 PYGMP11217 842 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 RIPK4P57078 832 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 ODF1Q14990 250 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 GRIK4Q16099 956 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 HLFQ16534 295 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 STRIP1Q5VSL9 837 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 ZBTB46Q86UZ6 589 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 CISD2Q8N5K1 135 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 RNF214Q8ND24 703 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 PRDM14Q9GZV8 571 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 SOX17Q9H6I2 414 aaPredicted RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 THG1LQ9NWX6 298 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 ABT1Q9ULW3 272 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 XDHP47989 1333 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 ALG1L2C9J202 215 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 ZSCAN20P17040 1043 aaPredicted RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 DEKP35659 375 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 NT5C2P49902 561 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 LBX1P52954 281 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 EPHB1P54762 984 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 IL2P60568 153 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 RBM10P98175 930 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 PIN1Q13526 163 aaPredicted RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 BBS9Q3SYG4 887 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 CCDC152Q4G0S7 254 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 OLFM4Q6UX06 510 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 CCDC103Q8IW40 242 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 CCAR1Q8IX12 1150 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 USP7Q93009 1102 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 TTC1Q99614 292 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 RHOBTB2Q9BYZ6 727 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 SPTLC3Q9NUV7 552 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 PPARGC1AQ9UBK2 798 aaKnown RBP6.06□□□□□ -1.44
NEK1-204ENST00000509912 TSPYL4Q9UJ04 414 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 CEP350Q5VT06 3117 aa6.06□□□□□ -1.44
NEK1-204ENST00000509912 FOCADQ5VW36 1801 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 WDR64B1ANS9 1081 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 NRG2O14511 850 aaPredicted RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 PRKD3O94806 890 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 GFRA1P56159 465 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 IQSEC1Q6DN90 963 aa6.05□□□□□ -1.44
NEK1-204ENST00000509912 FAM43BQ6ZT52 329 aaPredicted RBP6.05□□□□□ -1.44
NEK1-204ENST00000509912 MTDHQ86UE4 582 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms