RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 SMAP1Q8IYB5 467 aaPredicted RBP18.43■□□□□ 0.54
SKP2-205ENST00000509692 RNPC3Q96LT9 517 aaKnown RBP18.43■□□□□ 0.54
SKP2-205ENST00000509692 ZNF215Q9UL58 517 aaPredicted RBP18.43■□□□□ 0.54
SKP2-205ENST00000509692 MYH9P35579 1960 aaKnown RBP18.43■□□□□ 0.54
SKP2-205ENST00000509692 RBAK-RBAKDNI3L0D1 243 aa18.42■□□□□ 0.54
SKP2-205ENST00000509692 IQCF3P0C7M6 154 aa18.42■□□□□ 0.54
SKP2-205ENST00000509692 PRPHP41219 470 aa18.42■□□□□ 0.54
SKP2-205ENST00000509692 DNM1Q05193 864 aaKnown RBP18.42■□□□□ 0.54
SKP2-205ENST00000509692 PTPAQ15257 358 aa18.42■□□□□ 0.54
SKP2-205ENST00000509692 ATL3Q6DD88 541 aa18.42■□□□□ 0.54
SKP2-205ENST00000509692 SETD4Q9NVD3 440 aa18.42■□□□□ 0.54
SKP2-205ENST00000509692 SAMM50Q9Y512 469 aa18.42■□□□□ 0.54
SKP2-205ENST00000509692 C17orf102A2RUQ5 167 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 WDR64B1ANS9 1081 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 TREHO43280 583 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 LGR5O75473 907 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 ATG7O95352 703 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 SLC34A2O95436 690 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 MARK3P27448 753 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 TECP42680 631 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 NASPP49321 788 aaPredicted RBP18.41■□□□□ 0.54
SKP2-205ENST00000509692 SPIRE1Q08AE8 756 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 PTK7Q13308 1070 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 TMEM266Q2M3C6 531 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 TRIM71Q2Q1W2 868 aaKnown RBP18.41■□□□□ 0.54
SKP2-205ENST00000509692 MIS18BP1Q6P0N0 1132 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 ABHD15Q6UXT9 468 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 MIER3Q7Z3K6 550 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 RETREG2Q8NC44 543 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 CAGE1Q8TC20 777 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 GLG1Q92896 1179 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 ATP6V0A1Q93050 837 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 DISC1Q9NRI5 854 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 PCDHA10Q9Y5I2 948 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 EYSQ5T1H1 3165 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 CKBP12277 381 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 SFNP31947 248 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 JAK3P52333 1124 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 ADAM17P78536 824 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 RBL2Q08999 1139 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 GPNMBQ14956 572 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 RASIP1Q5U651 963 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 ARL6IP4Q66PJ3 421 aaKnown RBP18.41■□□□□ 0.54
SKP2-205ENST00000509692 NCAPH2Q6IBW4 605 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 PSRC1Q6PGN9 363 aaPredicted RBP18.41■□□□□ 0.54
SKP2-205ENST00000509692 DTHD1Q6ZMT9 781 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 EMSYQ7Z589 1322 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 SERINC5Q86VE9 423 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 SMARCAD1Q9H4L7 1026 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 ERAP1Q9NZ08 941 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 CFAP45Q9UL16 551 aa18.41■□□□□ 0.54
SKP2-205ENST00000509692 CHD9Q3L8U1 2897 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 EML1O00423 815 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 FGBP02675 491 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 PSAPP07602 524 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
SKP2-205ENST00000509692 SLC39A14Q15043 492 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 STK38Q15208 465 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 IL17AQ16552 155 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 TRAF7Q6Q0C0 670 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 DEFB128Q7Z7B8 93 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
SKP2-205ENST00000509692 RDM1Q8NG50 284 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 AFAP1L1Q8TED9 768 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 LMBR1Q8WVP7 490 aa18.4■□□□□ 0.54
SKP2-205ENST00000509692 POTEMA6NI47 508 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 YEATS4O95619 227 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 SELPP16109 830 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 OTOP2Q7RTS6 562 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 CCDC155Q8N6L0 562 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 LINC00301Q8NCQ3 95 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 CHAMP1Q96JM3 812 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 AZI2Q9H6S1 392 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 CXXC1Q9P0U4 656 aaPredicted RBP18.39■□□□□ 0.53
SKP2-205ENST00000509692 CHD7Q9P2D1 2997 aa18.39■□□□□ 0.53
SKP2-205ENST00000509692 NRCAMQ92823 1304 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 IGKV6D-21A0A0A0MT36 114 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 VWA3AA6NCI4 1184 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 BACH1O14867 736 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
SKP2-205ENST00000509692 MARCKSP29966 332 aaPredicted RBP18.38■□□□□ 0.53
SKP2-205ENST00000509692 STAT5BP51692 787 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 KRT85P78386 507 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 EPHA7Q15375 998 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 ZNF618Q5T7W0 954 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 FAM109BQ6ICB4 259 aaPredicted RBP18.38■□□□□ 0.53
SKP2-205ENST00000509692 SWSAP1Q6NVH7 229 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 LRRC8DQ7L1W4 858 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 HERVK_113Q902F9 699 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 RAB34Q9BZG1 259 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 MORC2Q9Y6X9 1032 aaPredicted RBP18.38■□□□□ 0.53
SKP2-205ENST00000509692 SPTLC2O15270 562 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 GNAT1P11488 350 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 RFC2P35250 354 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 PDIA5Q14554 519 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 FAM160B1Q5W0V3 765 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 GPR153Q6NV75 609 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 PLPPR4Q7Z2D5 763 aa18.38■□□□□ 0.53
SKP2-205ENST00000509692 CCDC60Q8IWA6 550 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms