RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SLC16A3O15427 465 aaKnown RBP19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 ENTPD3O75355 529 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 RPS6KA5O75582 802 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 GCNT3O95395 438 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 FTCDO95954 541 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 ACTN1P12814 892 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 UCHL3P15374 230 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 SLC9A1P19634 815 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 TNFRSF8P28908 595 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 MEI1Q5TIA1 1274 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 FLAD1Q8NFF5 587 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 MS4A14Q96JA4 679 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 BTNL10A8MVZ5 291 aa19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 PIK3CDO00329 1044 aa19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 NR3C1P04150 777 aa19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 GAP43P17677 238 aa19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 HOXD13P35453 343 aa19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 TCERG1LQ5VWI1 586 aa19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 IFT20Q8IY31 132 aa19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 RIN2Q8WYP3 895 aaPredicted RBP19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 TDRD3Q9H7E2 651 aaKnown RBP19.66■□□□□ 0.74
CCHCR1-228ENST00000509552 AGPSO00116 658 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 AKAP3O75969 853 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 PON1P27169 355 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 MRPS25P82663 173 aaKnown RBP19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 PTK2Q05397 1052 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 IFI16Q16666 785 aaKnown RBP19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 GBP6Q6ZN66 633 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 IRF2BP2Q7Z5L9 587 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 PACSIN1Q9BY11 444 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 PRR12Q9ULL5 1215 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 SYNPO2Q9UMS6 1093 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 ATRNL1Q5VV63 1379 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 RSPH10B2B2RC85 870 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 OPLAHO14841 1288 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 RSPH10BP0C881 870 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 DNA2P51530 1060 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 CYP2W1Q8TAV3 490 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 TAF4BQ92750 862 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 AKT1S1Q96B36 256 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 RUSC1Q9BVN2 902 aa19.65■□□□□ 0.74
CCHCR1-228ENST00000509552 H0YIN7 160 aa19.64■□□□□ 0.74
CCHCR1-228ENST00000509552 TEX2Q8IWB9 1127 aa19.64■□□□□ 0.74
CCHCR1-228ENST00000509552 CSRNP1Q96S65 589 aa19.64■□□□□ 0.74
CCHCR1-228ENST00000509552 OLFML3Q9NRN5 406 aa19.64■□□□□ 0.74
CCHCR1-228ENST00000509552 ASTN1O14525 1302 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 ANXA13P27216 316 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 STAT2P52630 851 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 ZNF571Q7Z3V5 609 aaPredicted RBP19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 SPICE1Q8N0Z3 855 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 FAM76AQ8TAV0 307 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 CAVIN3Q969G5 261 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 TUFT1Q9NNX1 390 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 RGL1Q9NZL6 768 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 ZNF219Q9P2Y4 722 aaPredicted RBP19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 FBXL5Q9UKA1 691 aa19.64■□□□□ 0.73
CCHCR1-228ENST00000509552 GOLGA6CA6NDK9 693 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 EML1O00423 815 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 OPA1O60313 960 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 FLOT1O75955 427 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 FAM13AO94988 1023 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 GOLGA6DP0CG33 693 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 TAL1P17542 331 aaPredicted RBP19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 EPHA7Q15375 998 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 CC2D2BQ6DHV5 1058 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 STYK1Q6J9G0 422 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 RINT1Q6NUQ1 792 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 DPY19L2P1Q6NXN4 242 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 VPS36Q86VN1 386 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 RUFY1Q96T51 708 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 ARHGEF10LQ9HCE6 1279 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 GOLGA6AQ9NYA3 693 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 PPP1R12BO60237 982 aaPredicted RBP19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 PRKCIP41743 596 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 JAG1P78504 1218 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 NNTQ13423 1086 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 ALS2CLQ60I27 953 aa19.63■□□□□ 0.73
CCHCR1-228ENST00000509552 IGLV3-22A0A075B6J6 115 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 A0A1W2PRG0 241 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 GOLGA8KD6RF30 607 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 CLIC2O15247 247 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 EIF3DO15371 548 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 HSF2BPO75031 334 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 CFBP00751 764 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 RPS6KA1Q15418 735 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 TPH2Q8IWU9 490 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 SLC35C1Q96A29 364 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 HSD17B14Q9BPX1 270 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 GCNT4Q9P109 453 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 PCDHB13Q9Y5F0 798 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 SCN9AQ15858 1988 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 GTPBP10A4D1E9 387 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 CES2O00748 559 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 NOP2P46087 812 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 CASP4P49662 377 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 CTTNQ14247 550 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 LRCH2Q5VUJ6 765 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 ALKBH5Q6P6C2 394 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 OTOP1Q7RTM1 612 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms