RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 EIF4HQ15056 248 aaKnown RBP3.93□□□□□ -1.78
XRCC4-204ENST00000509268 TRIM68Q6AZZ1 485 aa3.93□□□□□ -1.78
XRCC4-204ENST00000509268 DENND5AQ6IQ26 1287 aa3.93□□□□□ -1.78
XRCC4-204ENST00000509268 LARP4Q71RC2 724 aaKnown RBP eCLIP3.93□□□□□ -1.78
XRCC4-204ENST00000509268 RBM12BQ8IXT5 1001 aaKnown RBP3.93□□□□□ -1.78
XRCC4-204ENST00000509268 TMEM87AQ8NBN3 555 aa3.93□□□□□ -1.78
XRCC4-204ENST00000509268 SHCBP1Q8NEM2 672 aa3.93□□□□□ -1.78
XRCC4-204ENST00000509268 TRAIPQ9BWF2 469 aa3.93□□□□□ -1.78
XRCC4-204ENST00000509268 GPR27Q9NS67 375 aa3.93□□□□□ -1.78
XRCC4-204ENST00000509268 COX11Q9Y6N1 276 aa3.93□□□□□ -1.78
XRCC4-204ENST00000509268 LTFP02788 710 aa3.92□□□□□ -1.78
XRCC4-204ENST00000509268 CTGFP29279 349 aa3.92□□□□□ -1.78
XRCC4-204ENST00000509268 DBPQ10586 325 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-204ENST00000509268 TOB2Q14106 344 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-204ENST00000509268 PTPAQ15257 358 aa3.92□□□□□ -1.78
XRCC4-204ENST00000509268 ZNF326Q5BKZ1 582 aaKnown RBP3.92□□□□□ -1.78
XRCC4-204ENST00000509268 RHOUQ7L0Q8 258 aa3.92□□□□□ -1.78
XRCC4-204ENST00000509268 SLC25A43Q8WUT9 341 aaPredicted RBP3.92□□□□□ -1.78
XRCC4-204ENST00000509268 MIEF2Q96C03 454 aa3.92□□□□□ -1.78
XRCC4-204ENST00000509268 ACOT7O00154 380 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 MAN2A2P49641 1150 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 MEOX1P50221 254 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 SCNN1GP51170 649 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 KCNQ1P51787 676 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 HGFACQ04756 655 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 PRSS53Q2L4Q9 553 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 HABP4Q5JVS0 413 aaKnown RBP3.91□□□□□ -1.78
XRCC4-204ENST00000509268 LY6G5CQ5SRR4 150 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 SLC35F1Q5T1Q4 408 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 KCTD1Q719H9 257 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 ZNF227Q86WZ6 799 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 SYNE4Q8N205 404 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 TMEM145Q8NBT3 493 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 TMEM176AQ96HP8 235 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 LGR4Q9BXB1 951 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 KIAA1683Q9H0B3 1180 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 TOR3AQ9H497 397 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 SLC39A2Q9NP94 309 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 LRP2BPQ9P2M1 347 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 DSEQ9UL01 958 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 EFR3BQ9Y2G0 817 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 TELO2Q9Y4R8 837 aa3.91□□□□□ -1.78
XRCC4-204ENST00000509268 TBX1O43435 398 aa3.9□□□□□ -1.78
XRCC4-204ENST00000509268 TAP1Q03518 808 aa3.9□□□□□ -1.78
XRCC4-204ENST00000509268 SF1Q15637 639 aaKnown RBP3.9□□□□□ -1.78
XRCC4-204ENST00000509268 RSPO2Q6UXX9 243 aaPredicted RBP3.9□□□□□ -1.78
XRCC4-204ENST00000509268 VRK3Q8IV63 474 aa3.9□□□□□ -1.78
XRCC4-204ENST00000509268 GSPT2Q8IYD1 628 aaKnown RBP3.9□□□□□ -1.78
XRCC4-204ENST00000509268 C1orf159Q96HA4 380 aa3.9□□□□□ -1.78
XRCC4-204ENST00000509268 AGO3Q9H9G7 860 aaKnown RBP3.9□□□□□ -1.78
XRCC4-204ENST00000509268 METTL5Q9NRN9 209 aaKnown RBP3.9□□□□□ -1.78
XRCC4-204ENST00000509268 SH3BP1Q9Y3L3 701 aa3.9□□□□□ -1.78
XRCC4-204ENST00000509268 COL4A3Q01955 1670 aa3.9□□□□□ -1.79
XRCC4-204ENST00000509268 XDHP47989 1333 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 GNAT1P11488 350 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 MRE11P49959 708 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 STILQ15468 1287 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 ZNF394Q53GI3 561 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 OLFML1Q6UWY5 402 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 ERICH6Q7L0X2 663 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 FILIP1Q7Z7B0 1213 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 THAP3Q8WTV1 239 aaPredicted RBP3.89□□□□□ -1.79
XRCC4-204ENST00000509268 RABGGTAQ92696 567 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 SHDQ96IW2 340 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 FZD1Q9UP38 647 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 COL6A2P12110 1019 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 SV2CQ496J9 727 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 LDLRAD1Q5T700 205 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 Q6ZRM9 215 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 RTKN2Q8IZC4 609 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 WNK4Q96J92 1243 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 BRIP1Q9BX63 1249 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 SYNPO2LQ9H987 977 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 ARHGAP28Q9P2N2 729 aa3.89□□□□□ -1.79
XRCC4-204ENST00000509268 DDX41Q9UJV9 622 aaKnown RBP3.89□□□□□ -1.79
XRCC4-204ENST00000509268 GRID2IPA4D2P6 1211 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 NKRFO15226 690 aaKnown RBP eCLIP3.88□□□□□ -1.79
XRCC4-204ENST00000509268 B3GALT2O43825 422 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 MAP4K2Q12851 820 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 RIN1Q13671 783 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 OR14K1Q8NGZ2 314 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 RASGRP4Q8TDF6 673 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 GALNT8Q9NY28 637 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 PCDHGB7Q9Y5F8 929 aa3.88□□□□□ -1.79
XRCC4-204ENST00000509268 A0A0G2JNJ9 132 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 ABHD16AO95870 558 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 ITGB1P05556 798 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 RACK1P63244 317 aaKnown RBP3.87□□□□□ -1.79
XRCC4-204ENST00000509268 IL13RA1P78552 427 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 PAK2Q13177 524 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 RABL3Q5HYI8 236 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 HECTD2Q5U5R9 776 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 HDGFL2Q7Z4V5 671 aaPredicted RBP3.87□□□□□ -1.79
XRCC4-204ENST00000509268 ZNF276Q8N554 614 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 PROKR1Q8TCW9 393 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 KCTD13Q8WZ19 329 aa3.87□□□□□ -1.79
XRCC4-204ENST00000509268 PPARGC1AQ9UBK2 798 aaKnown RBP3.87□□□□□ -1.79
XRCC4-204ENST00000509268 Q9UFV3 132 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms