RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ACBD3Q9H3P7 528 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 PIDD1Q9HB75 910 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 VEZTQ9HBM0 779 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZNF287Q9HBT7 754 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 PI4KBQ9UBF8 816 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 ARPP21Q9UBL0 812 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 CTNNA3Q9UI47 895 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 SLC4A4Q9Y6R1 1079 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 ATRNL1Q5VV63 1379 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 TRPM7Q96QT4 1865 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 A0A0D9SFI3 127 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 CLRN2A0PK11 232 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 PRAMEF27A3QJZ7 478 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 FAM221AA4D161 298 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 GSG1L2A8MUP6 293 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 M0R2C6 588 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 HYAL3O43820 417 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 REC8O95072 547 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 F13A1P00488 732 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 HLA-DOAP06340 250 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 PCP11498 1178 aaKnown RBP6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 GBP2P32456 591 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 GJA8P48165 433 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 DYNLL1P63167 89 aaKnown RBP6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 DCAF15Q66K64 600 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 RELL1Q8IUW5 271 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 IFNL3Q8IZI9 196 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 ELMO3Q96BJ8 720 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 FAM227BQ96M60 508 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 OSBPL5Q9H0X9 879 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 ARMT1Q9H993 441 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 DCP1AQ9NPI6 582 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 HERC5Q9UII4 1024 aaKnown RBP6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 PCOLCE2Q9UKZ9 415 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 PCDHAC2Q9Y5I4 1007 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 CORINQ9Y5Q5 1042 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 FLT1P17948 1338 aa6.5□□□□□ -1.37
HMGB1P44-201ENST00000508597 CNTNAP1P78357 1384 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 BAZ2AQ9UIF9 1905 aaKnown RBP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 TCP10L2B9ZVM9 353 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 APPP05067 770 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 SLC3A2P08195 630 aaKnown RBP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 HSPD1P10809 573 aaKnown RBP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 TDO2P48775 406 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 GNL2Q13823 731 aaKnown RBP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 SCARA3Q6AZY7 606 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 FBXL19Q6PCT2 694 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 ARMC9Q7Z3E5 817 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 SKAP1Q86WV1 359 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 MAPKAPK5Q8IW41 473 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 SREK1Q8WXA9 508 aaKnown RBP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 TEPSINQ96N21 525 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 SEC62Q99442 399 aaKnown RBP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 YIPF2Q9BWQ6 316 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 NAPBQ9H115 298 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 MIR1-1HGQ9H1L0 117 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 DDX4Q9NQI0 724 aaKnown RBP6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 GINM1Q9NU53 330 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 MCM9Q9NXL9 1143 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 SWAP70Q9UH65 585 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 NAV1Q8NEY1 1877 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 PASKQ96RG2 1323 aa6.49□□□□□ -1.37
HMGB1P44-201ENST00000508597 GSC2O15499 205 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 PRKAB2O43741 272 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 FGAP02671 866 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 FAM87AP0C7U9 286 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 GRK4P32298 578 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 CD97P48960 835 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 CACNB3P54284 484 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 LMNB2Q03252 620 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 PDE4BQ07343 736 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 TCP10Q12799 353 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 PICALMQ13492 652 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 SLBPQ14493 270 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 SF3A1Q15459 793 aaKnown RBP6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 C12orf60Q5U649 245 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 OGFOD3Q6PK18 319 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZNF589Q86UQ0 364 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 SDR42E1Q8WUS8 393 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 MAP4K1Q92918 833 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 CDCA5Q96FF9 252 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 CCDC17Q96LX7 622 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 GLIS2Q9BZE0 524 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 SSU72Q9NP77 194 aaKnown RBP6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 ADAMTS1Q9UHI8 967 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 SERPINB13Q9UIV8 391 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 ANAPC4Q9UJX5 808 aa6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 ASTN2O75129 1339 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P44-201ENST00000508597 ROBO3Q96MS0 1386 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 MYH8P13535 1937 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 DDTLA6NHG4 134 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 ADM5C9JUS6 153 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZNF213O14771 459 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 FANCGO15287 622 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 CILPO75339 1184 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 CHGBP05060 677 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 EIF4A3P38919 411 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms