RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CCDC9Q9Y3X0 531 aaKnown RBP6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 TCAF1Q9Y4C2 921 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 EEA1Q15075 1411 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 KIAA0586Q9BVV6 1533 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 MADDQ8WXG6 1647 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 CCER2I3L3R5 266 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 ZNF623O75123 536 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 TACR2P21452 398 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 SELENOPP49908 381 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 Q8N1X5 172 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 SH3RF2Q8TEC5 729 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 ALG1Q9BT22 464 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 SLC39A2Q9NP94 309 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 PODXL2Q9NZ53 605 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 PTPN22Q9Y2R2 807 aa6□□□□□ -1.45
PDLIM5-211ENST00000508531 TCRBV5S4A2TA0A5A2 114 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 H0Y858 1186 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 ANP32AP39687 249 aaKnown RBP5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 SPATC1Q76KD6 591 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 IFNL2Q8IZJ0 200 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 Q8TCH9 128 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 GNRHR2Q96P88 292 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 LRRC37BQ96QE4 947 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 SPATA9Q9BWV2 254 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 SLC4A7Q9Y6M7 1214 aa5.99□□□□□ -1.45
PDLIM5-211ENST00000508531 RIMS1Q86UR5 1692 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 MUSKO15146 869 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 ZNF888P0CJ79 500 aaPredicted RBP5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 HSPA1LP34931 641 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 R3HDM1Q15032 1099 aaKnown RBP5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 BTBD8Q5XKL5 378 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 CRIP3Q6Q6R5 217 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 DPH6Q7L8W6 267 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 CCDC136Q96JN2 1154 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 LMF1Q96S06 567 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 VPS11Q9H270 941 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 YEATS2Q9ULM3 1422 aa5.98□□□□□ -1.45
PDLIM5-211ENST00000508531 UHRF1BP1LA0JNW5 1464 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 PPM1GO15355 546 aaPredicted RBP5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 FOXS1O43638 330 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 AMHP03971 560 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 GDF5P43026 501 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 RBM25P49756 843 aaKnown RBP5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 USP10Q14694 798 aaKnown RBP5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 SPDYAQ5MJ70 313 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 MTDHQ86UE4 582 aaKnown RBP5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 REXO1L1PQ8IX06 675 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 ZNF747Q9BV97 191 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 KATNBL1Q9H079 304 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 SEC61A2Q9H9S3 476 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 RIC8BQ9NVN3 520 aa5.97□□□□□ -1.45
PDLIM5-211ENST00000508531 BCORL1Q5H9F3 1711 aa5.96□□□□□ -1.45
PDLIM5-211ENST00000508531 WDR7Q9Y4E6 1490 aa5.96□□□□□ -1.45
PDLIM5-211ENST00000508531 MAGI3Q5TCQ9 1506 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 KDM5BQ9UGL1 1544 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 FAM90A27PA6NNH2 459 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 AQP7O14520 342 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 STK10O94804 968 aaKnown RBP5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 DBPQ10586 325 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 PAK1Q13153 545 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 TCTN3Q6NUS6 607 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 ARHGAP36Q6ZRI8 547 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 GIMAP8Q8ND71 665 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 ZNF669Q96BR6 464 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 CDC6Q99741 560 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 PFDN2Q9UHV9 154 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 SRPK3Q9UPE1 567 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 MSRB2Q9Y3D2 182 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 PCDHA8Q9Y5H6 950 aa5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 ZCCHC11Q5TAX3 1644 aaKnown RBP5.96□□□□□ -1.46
PDLIM5-211ENST00000508531 ESYT3A0FGR9 886 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 CCDC85CA6NKD9 419 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 U2SURPO15042 1029 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 PDPK1O15530 556 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 ADCY3O60266 1144 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 PYGMP11217 842 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 PTPN1P18031 435 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 RANGAP1P46060 587 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 RRADP55042 308 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 GPR19Q15760 415 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 ZNF568Q3ZCX4 644 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 MTERF2Q49AM1 385 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 MAMDC2Q7Z304 686 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 TAX1BP1Q86VP1 789 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 SCUBE1Q8IWY4 988 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 ZFPM1Q8IX07 1006 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 CKAP2LQ8IYA6 745 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 NLGN4XQ8N0W4 816 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 NEIL1Q96FI4 390 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 SORCS2Q96PQ0 1159 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 CARD11Q9BXL7 1154 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 SEMA4AQ9H3S1 761 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 CATSPERZQ9NTU4 200 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 ARHGAP28Q9P2N2 729 aa5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 ZFR2Q9UPR6 939 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-211ENST00000508531 TRBV23-1A0A0A0MS06 115 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 AMY2AP04746 511 aa5.94□□□□□ -1.46
PDLIM5-211ENST00000508531 KRT15P19012 456 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms