RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ARHGAP29Q52LW3 1261 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CATSPERGQ6ZRH7 1159 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 LUZP1Q86V48 1076 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 BANK1Q8NDB2 785 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ACSF2Q96CM8 615 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 TBC1D31Q96DN5 1066 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PLIN2Q99541 437 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MTA3Q9BTC8 594 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PRDM16Q9HAZ2 1276 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CLDND1Q9NY35 253 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PCDHA6Q9UN73 950 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 DNM3Q9UQ16 869 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 SSUH2Q9Y2M2 353 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PCDHA8Q9Y5H6 950 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 FAM169AQ9Y6X4 670 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 KIAA1551Q9HCM1 1747 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MYH6P13533 1939 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MYH14Q7Z406 1995 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 hCG_1642624A0A1W2PR95 340 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 FAM170AA1A519 330 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 USO1O60763 962 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ITGA4P13612 1032 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 AKR1B1P15121 316 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PSEN2P49810 448 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 LY6KQ17RY6 165 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 WDR44Q5JSH3 913 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 C4orf50Q6ZRC1 276 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PRR23BQ6ZRT6 265 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 C16orf86Q6ZW13 317 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ADAT2Q7Z6V5 191 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 DDX53Q86TM3 631 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ANKRD13BQ86YJ7 626 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 FAM43AQ8N2R8 423 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 DDX12PQ92771 950 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 HHIPL1Q96JK4 782 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CEP63Q96MT8 703 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 NOX5Q96PH1 765 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 SPAG5Q96R06 1193 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 NCAPGQ9BPX3 1015 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MYL10Q9BUA6 226 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MAK16Q9BXY0 300 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PFDN4Q9NQP4 134 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 BRPF3Q9ULD4 1205 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PRKAB1Q9Y478 270 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PPME1Q9Y570 386 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 SCINQ9Y6U3 715 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 V9GY48 417 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CSF1RP07333 972 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 RFC2P35250 354 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 DDIT3P35638 169 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CLK2P49760 499 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 SEMA3FQ13275 785 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 BAATQ14032 418 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 VEPH1Q14D04 833 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PTPAQ15257 358 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 LIN9Q5TKA1 542 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 DTHD1Q6ZMT9 781 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 KRT25Q7Z3Z0 450 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 TDHQ8IZJ6 230 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 RDH13Q8NBN7 331 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 COLEC11Q9BWP8 271 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 THG1LQ9NWX6 298 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 USP18Q9UMW8 372 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MGAMO43451 1857 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF609O15014 1411 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MOXD2PA6NHM9 499 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 RSPH10B2B2RC85 870 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 H7C4K7 107 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CALUO43852 315 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ZC3H11AO75152 810 aaKnown RBP eCLIP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ERLIN1O75477 346 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 URODP06132 367 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 RSPH10BP0C881 870 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PAFAH1B1P43034 410 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ALDH1A3P47895 512 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CDC42EP1Q00587 391 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CREMQ03060 361 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 BFSP1Q12934 665 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PDIA6Q15084 440 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 FAM110CQ1W6H9 321 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CRY2Q49AN0 593 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 IQSEC1Q6DN90 963 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 FAM114A1Q8IWE2 563 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PGBD1Q96JS3 809 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 FAM227BQ96M60 508 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 VTA1Q9NP79 307 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 SLC9A2Q9UBY0 812 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 KCNG1Q9UIX4 513 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ACAD8Q9UKU7 415 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MAGED2Q9UNF1 606 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 CNTRLQ7Z7A1 2325 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 KIF13BQ9NQT8 1826 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 COL24A1Q17RW2 1714 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 KIF1CO43896 1103 aaKnown RBP3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MBD3O95983 291 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 HOXC6P09630 235 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 ACADMP11310 421 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 PLCD1P51178 756 aa3.24□□□□□ -1.89
NEDD4-208ENST00000508342 MRPS5P82675 430 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms