RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 MCTP2Q6DN12 878 aa16.22■□□□□ 0.19
RAB28-205ENST00000508274 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
RAB28-205ENST00000508274 RSPH3Q86UC2 560 aa16.22■□□□□ 0.19
RAB28-205ENST00000508274 LENG9Q96B70 501 aa16.22■□□□□ 0.19
RAB28-205ENST00000508274 ZNF274Q96GC6 653 aaPredicted RBP16.22■□□□□ 0.19
RAB28-205ENST00000508274 THEGQ9P2T0 379 aa16.22■□□□□ 0.19
RAB28-205ENST00000508274 RRN3P2A6NIE6 340 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 CPLX1O14810 134 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 GTPBP6O43824 516 aaPredicted RBP16.21■□□□□ 0.19
RAB28-205ENST00000508274 POU3F3P20264 500 aaPredicted RBP16.21■□□□□ 0.19
RAB28-205ENST00000508274 NLRP5P59047 1200 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 HTRA4P83105 476 aaPredicted RBP16.21■□□□□ 0.19
RAB28-205ENST00000508274 SSRP1Q08945 709 aaKnown RBP16.21■□□□□ 0.19
RAB28-205ENST00000508274 TRIM22Q8IYM9 498 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 APBB2Q92870 758 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 TOP1MTQ969P6 601 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 INSL6Q9Y581 213 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 TTC28Q96AY4 2481 aa16.21■□□□□ 0.19
RAB28-205ENST00000508274 ATP4AP20648 1035 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 CIITAP33076 1130 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 ERVK-21P61565 698 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 MRPS6P82932 125 aaKnown RBP16.21■□□□□ 0.18
RAB28-205ENST00000508274 FBXO47Q5MNV8 452 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 SWSAP1Q6NVH7 229 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.18
RAB28-205ENST00000508274 C17orf80Q9BSJ5 609 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 AGO3Q9H9G7 860 aaKnown RBP16.21■□□□□ 0.18
RAB28-205ENST00000508274 SUGCTQ9HAC7 445 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 ZNF302Q9NR11 478 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 SH3GLB2Q9NR46 395 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 PCDHA2Q9Y5H9 948 aa16.21■□□□□ 0.18
RAB28-205ENST00000508274 DEXIO95424 95 aa16.2■□□□□ 0.18
RAB28-205ENST00000508274 TJAP1Q5JTD0 557 aa16.2■□□□□ 0.18
RAB28-205ENST00000508274 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
RAB28-205ENST00000508274 PDXDC2PQ6P474 469 aa16.2■□□□□ 0.18
RAB28-205ENST00000508274 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
RAB28-205ENST00000508274 TRMT1LQ7Z2T5 733 aaKnown RBP16.2■□□□□ 0.18
RAB28-205ENST00000508274 SP7Q8TDD2 431 aaPredicted RBP16.2■□□□□ 0.18
RAB28-205ENST00000508274 YME1L1Q96TA2 773 aa16.2■□□□□ 0.18
RAB28-205ENST00000508274 TTC3P53804 2025 aa16.2■□□□□ 0.18
RAB28-205ENST00000508274 HBP1O60381 514 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 SLC26A2P50443 739 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 SCRN1Q12765 414 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 SKIV2LQ15477 1246 aaKnown RBP16.19■□□□□ 0.18
RAB28-205ENST00000508274 NPY5RQ15761 445 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 ZNF746Q6NUN9 644 aaPredicted RBP16.19■□□□□ 0.18
RAB28-205ENST00000508274 MIS18BP1Q6P0N0 1132 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 TSHZ1Q6ZSZ6 1077 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 ATP8B4Q8TF62 1192 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 TNPO1Q92973 898 aaKnown RBP16.19■□□□□ 0.18
RAB28-205ENST00000508274 GJA10Q969M2 543 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 PCDHA4Q9UN74 947 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 TRPV2Q9Y5S1 764 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 TCF20Q9UGU0 1960 aaKnown RBP16.19■□□□□ 0.18
RAB28-205ENST00000508274 RALGAPA2Q2PPJ7 1873 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 COL4A6Q14031 1691 aa16.19■□□□□ 0.18
RAB28-205ENST00000508274 ZBTB42B2RXF5 422 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 M0R2N6 131 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 MSH4O15457 936 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 KLRC1P26715 233 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 CD52P31358 61 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 TFF2Q03403 129 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 IER5Q5VY09 327 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 TBCKQ8TEA7 893 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 ATXN2LQ8WWM7 1075 aaKnown RBP16.18■□□□□ 0.18
RAB28-205ENST00000508274 LINC01599Q8WXQ3 324 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 BRWD1Q9NSI6 2320 aa16.18■□□□□ 0.18
RAB28-205ENST00000508274 SMIM35A0A1B0GVV1 85 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 TDP2O95551 362 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 KRT76Q01546 638 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 BLIDQ8IZY5 108 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 ASB2Q96Q27 587 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 GABBR1Q9UBS5 961 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 KCNJ14Q9UNX9 436 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 SAMM50Q9Y512 469 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
RAB28-205ENST00000508274 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 M0QZ92 97 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 CPLX2Q6PUV4 134 aaKnown RBP16.17■□□□□ 0.18
RAB28-205ENST00000508274 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 SMAP1Q8IYB5 467 aaPredicted RBP16.17■□□□□ 0.18
RAB28-205ENST00000508274 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 FBXO22Q8NEZ5 403 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 PPP1R16BQ96T49 567 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
RAB28-205ENST00000508274 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
RAB28-205ENST00000508274 GJB4Q9NTQ9 266 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 TCEAL9Q9UHQ7 104 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 PCDHA10Q9Y5I2 948 aa16.17■□□□□ 0.18
RAB28-205ENST00000508274 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
RAB28-205ENST00000508274 COL1A2P08123 1366 aa16.16■□□□□ 0.18
RAB28-205ENST00000508274 ENPP3O14638 875 aa16.16■□□□□ 0.18
RAB28-205ENST00000508274 CHMP2AO43633 222 aa16.16■□□□□ 0.18
RAB28-205ENST00000508274 RPLP2P05387 115 aaKnown RBP16.16■□□□□ 0.18
RAB28-205ENST00000508274 PSAPP07602 524 aa16.16■□□□□ 0.18
RAB28-205ENST00000508274 USP11P51784 963 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms