RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 TNS2Q63HR2 1409 aa9.14□□□□□ -0.95
CCDC149-206ENST00000508236 MYH15Q9Y2K3 1946 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 BLACEA4D250 179 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 GFRA3O60609 400 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 CIAO1O76071 339 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 RGS20O76081 388 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 CST3P01034 146 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 CAP2P40123 477 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 PIP4K2AP48426 406 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 TMPRSS15P98073 1019 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 ST3GAL1Q11201 340 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 SLBPQ14493 270 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 FOXD4L6Q3SYB3 417 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 PRAMEF13Q5VWM6 474 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 FOXD4L3Q6VB84 417 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 ATG9AQ7Z3C6 839 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 ZNF589Q86UQ0 364 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 MAP4K3Q8IVH8 894 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 C7orf61Q8IZ16 206 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 ARHGEF39Q8N4T4 335 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 CNTD1Q8N815 330 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 NECAB1Q8N987 351 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 KBTBD3Q8NAB2 608 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 MAGEB10Q96LZ2 347 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 FANCD2OSQ96PS1 177 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 NEK1Q96PY6 1258 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 TEX13AQ9BXU3 409 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-206ENST00000508236 IFT22Q9H7X7 185 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 TRHDEQ9UKU6 1024 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 COMMD10Q9Y6G5 202 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 ZNF609O15014 1411 aa9.13□□□□□ -0.95
CCDC149-206ENST00000508236 MYH7P12883 1935 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 TCRBV16S1A1N1A0A5B0 115 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 VPS37CA5D8V6 355 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 EYA2O00167 538 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 NEMP1O14524 444 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 KIF1CO43896 1103 aaKnown RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 ITGA4P13612 1032 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 CD68P34810 354 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 KRT85P78386 507 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 AUHQ13825 339 aaKnown RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 TOB2Q14106 344 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 HSP90AB3PQ58FF7 597 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 NBPF12Q5TAG4 269 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 CDCA2Q69YH5 1023 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 PPP4R4Q6NUP7 873 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 TTLL7Q6ZT98 887 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 UBE2R2Q712K3 238 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 TCEAL8Q8IYN2 117 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 ADCY4Q8NFM4 1077 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 KCTD13Q8WZ19 329 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 CAMKK2Q96RR4 588 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 MYCBPQ99417 103 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 ISCA1Q9BUE6 129 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 RTFDC1Q9BY42 306 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 ATXN3LQ9H3M9 355 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 GP6Q9HCN6 339 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
CCDC149-206ENST00000508236 SPEF1Q9Y4P9 236 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 ITGB4P16144 1822 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 STRCQ7RTU9 1775 aa9.12□□□□□ -0.95
CCDC149-206ENST00000508236 TOGARAM1Q9Y4F4 1720 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 ELP1O95163 1332 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 GABRDO14764 452 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 SHOXO15266 292 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 FIBPO43427 364 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 CREB3O43889 395 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 ZEB2O60315 1214 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 APBA3O96018 575 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 A1BGP04217 495 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 BPIP17213 487 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 TRIM28Q13263 835 aaKnown RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 TCIRG1Q13488 830 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 SF1Q15637 639 aaKnown RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 NTRK3Q16288 839 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 ZMYM1Q5SVZ6 1142 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 SYDE2Q5VT97 1194 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 TMED8Q6PL24 325 aaPredicted RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 SLCO4C1Q6ZQN7 724 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 TSHZ1Q6ZSZ6 1077 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 ZNF771Q7L3S4 317 aaPredicted RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 MAMDC2Q7Z304 686 aaPredicted RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 UBE3DQ7Z6J8 389 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 MNS1Q8NEH6 495 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 COG1Q8WTW3 980 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 EDC3Q96F86 508 aaKnown RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 NEUROD6Q96NK8 337 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 PLCD4Q9BRC7 762 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 LLPHQ9BRT6 129 aaKnown RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 DSCC1Q9BVC3 393 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 SCAND2PQ9GZW5 306 aaPredicted RBP9.11□□□□□ -0.95
CCDC149-206ENST00000508236 PAG1Q9NWQ8 432 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 ZNF180Q9UJW8 692 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 NHSL1Q5SYE7 1610 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 ANKRD36CQ5JPF3 1778 aa9.11□□□□□ -0.95
CCDC149-206ENST00000508236 MYH3P11055 1940 aa9.1□□□□□ -0.95
CCDC149-206ENST00000508236 B4E1Z4 1266 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms