RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SRGAP2BP0DMP2 458 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 ID4P47928 161 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 HAND2P61296 217 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 KCNC3Q14003 757 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 DUSP6Q16828 381 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 MCTP2Q6DN12 878 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 TBC1D10CQ8IV04 446 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 RASGRP4Q8TDF6 673 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 ZKSCAN3Q9BRR0 538 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 S1PR5Q9H228 398 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 BCAS3Q9H6U6 928 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 PCDHA1Q9Y5I3 950 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 ZNF292O60281 2723 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 LAMA4Q16363 1823 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 NEDD4P46934 1319 aa10.58□□□□□ -0.72
CAST-220ENST00000508117 A0A0D9SFI3 127 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 FIBPO43427 364 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 KDM4AO75164 1064 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 POLR2MP0CAP2 368 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 HOXB8P17481 243 aaPredicted RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 RUFY4Q6ZNE9 571 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 RTN4RL1Q86UN2 441 aaPredicted RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 TRIM50Q86XT4 487 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 OTUD7AQ8TE49 926 aaPredicted RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 NKD2Q969F2 451 aaPredicted RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 ZSCAN10Q96SZ4 725 aaPredicted RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 AGO3Q9H9G7 860 aaKnown RBP10.57□□□□□ -0.72
CAST-220ENST00000508117 VAT1LQ9HCJ6 419 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 SORCS3Q9UPU3 1222 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
CAST-220ENST00000508117 FNDC1Q4ZHG4 1894 aaPredicted RBP10.56□□□□□ -0.72
CAST-220ENST00000508117 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 ARHGAP33O14559 1287 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 FSCN2O14926 492 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 CSPG5O95196 566 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 PDGFBP01127 241 aaPredicted RBP10.56□□□□□ -0.72
CAST-220ENST00000508117 SCG2P13521 617 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 HOXA13P31271 388 aaPredicted RBP10.56□□□□□ -0.72
CAST-220ENST00000508117 PPP1R15BQ5SWA1 713 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 IER5Q5VY09 327 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 ANKRD54Q6NXT1 300 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 ENAHQ8N8S7 591 aaPredicted RBP10.56□□□□□ -0.72
CAST-220ENST00000508117 TMEM105Q8N8V8 129 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 GIMAP8Q8ND71 665 aaPredicted RBP10.56□□□□□ -0.72
CAST-220ENST00000508117 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 AAASQ9NRG9 546 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 TUBE1Q9UJT0 475 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 LZTS1Q9Y250 596 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 NR2E1Q9Y466 385 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 PCDHB12Q9Y5F1 795 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 LOXHD1Q8IVV2 1947 aa10.56□□□□□ -0.72
CAST-220ENST00000508117 EP300Q09472 2414 aaPredicted RBP10.56□□□□□ -0.72
CAST-220ENST00000508117 ZNF213O14771 459 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 PDE4AP27815 886 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 CLCN5P51795 746 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 MFAP1P55081 439 aaKnown RBP10.55□□□□□ -0.72
CAST-220ENST00000508117 MRPS6P82932 125 aaKnown RBP10.55□□□□□ -0.72
CAST-220ENST00000508117 PPFIA1Q13136 1202 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 GRIK4Q16099 956 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 MARCH8Q5T0T0 291 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 UTP14CQ5TAP6 766 aaKnown RBP10.55□□□□□ -0.72
CAST-220ENST00000508117 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 SYCE2Q6PIF2 218 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 ZBTB33Q86T24 672 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 ZNF589Q86UQ0 364 aaPredicted RBP10.55□□□□□ -0.72
CAST-220ENST00000508117 FCHSD1Q86WN1 690 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 KREMEN2Q8NCW0 462 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 MICAL1Q8TDZ2 1067 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 DNAJB3Q8WWF6 145 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 NECTIN4Q96NY8 510 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 ERAP1Q9NZ08 941 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 ZSWIM5Q9P217 1185 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 PCDHGC5Q9Y5F6 944 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 IGSF9BQ9UPX0 1349 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 KDM3AQ9Y4C1 1321 aa10.55□□□□□ -0.72
CAST-220ENST00000508117 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
CAST-220ENST00000508117 KLRF2D3W0D1 207 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 PER2O15055 1255 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 CD52P31358 61 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 RBM10P98175 930 aaKnown RBP10.54□□□□□ -0.72
CAST-220ENST00000508117 C20orf194Q5TEA3 1177 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 ADSSL1Q8N142 457 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 BAZ2BQ9UIF8 2168 aaKnown RBP10.54□□□□□ -0.72
CAST-220ENST00000508117 RCAN3Q9UKA8 241 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 PADI3Q9ULW8 664 aa10.54□□□□□ -0.72
CAST-220ENST00000508117 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
CAST-220ENST00000508117 WDR87Q6ZQQ6 2873 aa10.53□□□□□ -0.72
CAST-220ENST00000508117 RRN3P2A6NIE6 340 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms