RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 AMACRQ9UHK6 382 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 WTIPA6NIX2 430 aaPredicted RBP19.35■□□□□ 0.69
NUP54-205ENST00000507257 PHF20L1A8MW92 1017 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 EDIL3O43854 480 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 RASA1P20936 1047 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 NOVP48745 357 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 DRG2P55039 364 aaKnown RBP19.35■□□□□ 0.69
NUP54-205ENST00000507257 KCNH2Q12809 1159 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 FRMD5Q7Z6J6 570 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 NT5DC3Q86UY8 548 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 DYNLL2Q96FJ2 89 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 SCLT1Q96NL6 688 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 AP1M1Q9BXS5 423 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 NOD2Q9HC29 1040 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 BATF3Q9NR55 127 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.35■□□□□ 0.69
NUP54-205ENST00000507257 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
NUP54-205ENST00000507257 DCDC2CA8MYV0 355 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 CETN3O15182 167 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 SLC37A4O43826 429 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 H2AFZP0C0S5 128 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 EPS15P42566 896 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 CRKLP46109 303 aaKnown RBP19.34■□□□□ 0.69
NUP54-205ENST00000507257 PPP4CP60510 307 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 H2AFVQ71UI9 128 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 VPS36Q86VN1 386 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 FMNL3Q8IVF7 1028 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 ATP8B4Q8TF62 1192 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 NUDT12Q9BQG2 462 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 TMEM109Q9BVC6 243 aa19.34■□□□□ 0.69
NUP54-205ENST00000507257 FRMD3A2A2Y4 597 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 FAM187AA6NFU0 413 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 POTEMA6NI47 508 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 TTI1O43156 1089 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 CTNND1O60716 968 aaKnown RBP19.33■□□□□ 0.69
NUP54-205ENST00000507257 RTN2O75298 545 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 UCHL3P15374 230 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 PTENP60484 403 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 PPP1R18Q6NYC8 613 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 CLEC4GQ6UXB4 293 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 ATXN2LQ8WWM7 1075 aaKnown RBP19.33■□□□□ 0.69
NUP54-205ENST00000507257 BIN2Q9UBW5 565 aaPredicted RBP19.33■□□□□ 0.69
NUP54-205ENST00000507257 STX8Q9UNK0 236 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 XIRP1Q702N8 1843 aaKnown RBP19.33■□□□□ 0.69
NUP54-205ENST00000507257 SNED1Q8TER0 1413 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 TAF1P21675 1872 aa19.33■□□□□ 0.69
NUP54-205ENST00000507257 DOT1LQ8TEK3 1739 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 CCDC189A1A4V9 331 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 CCDC169A6NNP5 214 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 TULP1O00294 542 aaPredicted RBP19.33■□□□□ 0.68
NUP54-205ENST00000507257 SCP2P22307 547 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 GBP1P32455 592 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 ARID5AQ03989 594 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 DUPD1Q68J44 220 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 NEDD1Q8NHV4 660 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 SCFD1Q8WVM8 642 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 SPAG5Q96R06 1193 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 NAP1L3Q99457 506 aaPredicted RBP19.33■□□□□ 0.68
NUP54-205ENST00000507257 ANKRD2Q9GZV1 360 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 PABPC3Q9H361 631 aaKnown RBP19.33■□□□□ 0.68
NUP54-205ENST00000507257 ZDHHC18Q9NUE0 388 aa19.33■□□□□ 0.68
NUP54-205ENST00000507257 CNOT7Q9UIV1 285 aaKnown RBP19.33■□□□□ 0.68
NUP54-205ENST00000507257 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.33■□□□□ 0.68
NUP54-205ENST00000507257 PITPNM2Q9BZ72 1349 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 GOLGA8HP0CJ92 632 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 ITGA4P13612 1032 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 ADAM9Q13443 819 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 COL23A1Q86Y22 540 aaPredicted RBP19.32■□□□□ 0.68
NUP54-205ENST00000507257 DZIP1Q86YF9 867 aaKnown RBP19.32■□□□□ 0.68
NUP54-205ENST00000507257 CCDC63Q8NA47 563 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 FAXDC2Q96IV6 333 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 MXD3Q9BW11 206 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 EPB41L4BQ9H329 900 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.32■□□□□ 0.68
NUP54-205ENST00000507257 TRAF3IP3Q9Y228 551 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 NCANO14594 1321 aa19.32■□□□□ 0.68
NUP54-205ENST00000507257 NHSQ6T4R5 1651 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 MYH14Q7Z406 1995 aaKnown RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 RGL2O15211 777 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 TDP2O95551 362 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 AFPP02771 609 aaKnown RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 ALADP13716 330 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 JAM2P57087 298 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 DHX34Q14147 1143 aaKnown RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 SLC10A5Q5PT55 438 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 BTNL9Q6UXG8 535 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 RSRC1Q96IZ7 334 aaKnown RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 ADAM7Q9H2U9 754 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 HDAC9Q9UKV0 1011 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 AMFRQ9UKV5 643 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 DDX60LQ5H9U9 1706 aaKnown RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 AFF2P51816 1311 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 CAND2O75155 1236 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 AGTP01019 485 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 SSBP05455 408 aaKnown RBP eCLIP19.31■□□□□ 0.68
NUP54-205ENST00000507257 MMEP08473 750 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 ADCY7P51828 1080 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 CLNS1AP54105 237 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms