RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 BBXQ8WY36 941 aaPredicted RBP21.77■■□□□ 1.08
LMNA-221ENST00000506981 WNT8BQ93098 351 aa21.77■■□□□ 1.08
LMNA-221ENST00000506981 FTOQ9C0B1 505 aaKnown RBP eCLIP21.77■■□□□ 1.08
LMNA-221ENST00000506981 K7ELQ4 463 aaPredicted RBP21.76■■□□□ 1.07
LMNA-221ENST00000506981 ACTN1P12814 892 aa21.76■■□□□ 1.07
LMNA-221ENST00000506981 PPP2R5CQ13362 524 aa21.76■■□□□ 1.07
LMNA-221ENST00000506981 ZNF484Q5JVG2 852 aa21.76■■□□□ 1.07
LMNA-221ENST00000506981 ZNF618Q5T7W0 954 aa21.76■■□□□ 1.07
LMNA-221ENST00000506981 MICAL3Q7RTP6 2002 aa21.76■■□□□ 1.07
LMNA-221ENST00000506981 TRMT1LQ7Z2T5 733 aaKnown RBP21.76■■□□□ 1.07
LMNA-221ENST00000506981 CEP131Q9UPN4 1083 aa21.76■■□□□ 1.07
LMNA-221ENST00000506981 ARID2Q68CP9 1835 aa21.76■■□□□ 1.07
LMNA-221ENST00000506981 MBLAC1A4D2B0 266 aaPredicted RBP21.75■■□□□ 1.07
LMNA-221ENST00000506981 RSPH10B2B2RC85 870 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 RSPH10BP0C881 870 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 MCM7P33993 719 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 TRAPPC10P48553 1259 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 ORC2Q13416 577 aaPredicted RBP21.75■■□□□ 1.07
LMNA-221ENST00000506981 LARP1BQ659C4 914 aaKnown RBP21.75■■□□□ 1.07
LMNA-221ENST00000506981 HSCBQ8IWL3 235 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 HAS1Q92839 578 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 NRBP2Q9NSY0 501 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 VAV3Q9UKW4 847 aa21.75■■□□□ 1.07
LMNA-221ENST00000506981 KIF28PB7ZC32 967 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 DKC1O60832 514 aaKnown RBP eCLIP21.74■■□□□ 1.07
LMNA-221ENST00000506981 OATP04181 439 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 CTSHP09668 335 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 U2AF2P26368 475 aaKnown RBP eCLIP21.74■■□□□ 1.07
LMNA-221ENST00000506981 FXR1P51114 621 aaKnown RBP eCLIP21.74■■□□□ 1.07
LMNA-221ENST00000506981 PRKCEQ02156 737 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 TTC38Q5R3I4 469 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 NCAPH2Q6IBW4 605 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 B3GNT9Q6UX72 402 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 C16orf59Q7L2K0 433 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 OTOP2Q7RTS6 562 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 TRAPPC12Q8WVT3 735 aa21.74■■□□□ 1.07
LMNA-221ENST00000506981 ZBBXA8MT70 800 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 M0QZ92 97 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 ATP4AP20648 1035 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 MARCH8Q5T0T0 291 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 RUFY4Q6ZNE9 571 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 HERVK_113Q902F9 699 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 FAM49AQ9H0Q0 323 aaPredicted RBP21.73■■□□□ 1.07
LMNA-221ENST00000506981 PCDHA12Q9UN75 941 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 PCDHA2Q9Y5H9 948 aa21.73■■□□□ 1.07
LMNA-221ENST00000506981 WNT7AO00755 349 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 PDCP20941 246 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 TXKP42681 527 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 PSMC5P62195 406 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 ZNF174Q15697 407 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 UGCGQ16739 394 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 MTHFD1LQ6UB35 978 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 RPAINQ86UA6 219 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 BANK1Q8NDB2 785 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 DNAJB3Q8WWF6 145 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 SNX21Q969T3 373 aa21.72■■□□□ 1.07
LMNA-221ENST00000506981 SEPT9Q9UHD8 586 aaPredicted RBP21.72■■□□□ 1.07
LMNA-221ENST00000506981 RANBP2P49792 3224 aaKnown RBP21.71■■□□□ 1.07
LMNA-221ENST00000506981 SMIM35A0A1B0GVV1 85 aa21.71■■□□□ 1.07
LMNA-221ENST00000506981 ZNF862O60290 1169 aa21.71■■□□□ 1.07
LMNA-221ENST00000506981 KLRC1P26715 233 aa21.71■■□□□ 1.07
LMNA-221ENST00000506981 EPHA7Q15375 998 aa21.71■■□□□ 1.07
LMNA-221ENST00000506981 CNKSR3Q6P9H4 555 aa21.71■■□□□ 1.07
LMNA-221ENST00000506981 INTS4Q96HW7 963 aaKnown RBP21.71■■□□□ 1.07
LMNA-221ENST00000506981 TTC12Q9H892 705 aaPredicted RBP21.71■■□□□ 1.07
LMNA-221ENST00000506981 PTPRSQ13332 1948 aa21.7■■□□□ 1.07
LMNA-221ENST00000506981 EML1O00423 815 aa21.7■■□□□ 1.06
LMNA-221ENST00000506981 NBNO60934 754 aa21.7■■□□□ 1.06
LMNA-221ENST00000506981 P4HBP07237 508 aaKnown RBP21.7■■□□□ 1.06
LMNA-221ENST00000506981 OR52Z1P0C646 297 aa21.7■■□□□ 1.06
LMNA-221ENST00000506981 QARSP47897 775 aaKnown RBP21.7■■□□□ 1.06
LMNA-221ENST00000506981 XKR3Q5GH77 459 aa21.7■■□□□ 1.06
LMNA-221ENST00000506981 IER5Q5VY09 327 aa21.7■■□□□ 1.06
LMNA-221ENST00000506981 TRAF7Q6Q0C0 670 aa21.7■■□□□ 1.06
LMNA-221ENST00000506981 MYH15Q9Y2K3 1946 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.69■■□□□ 1.06
LMNA-221ENST00000506981 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.69■■□□□ 1.06
LMNA-221ENST00000506981 VPS37CA5D8V6 355 aaPredicted RBP21.69■■□□□ 1.06
LMNA-221ENST00000506981 SOX1O00570 391 aaPredicted RBP21.69■■□□□ 1.06
LMNA-221ENST00000506981 MAGEB2O15479 319 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 BAIAP3O94812 1187 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 CXCL10P02778 98 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 MRPS6P82932 125 aaKnown RBP21.69■■□□□ 1.06
LMNA-221ENST00000506981 TMEM266Q2M3C6 531 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 FAM26DQ5JW98 314 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 RASIP1Q5U651 963 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 NEK9Q8TD19 979 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 ZBTB10Q96DT7 871 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 LRCH3Q96II8 777 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 MTMR9Q96QG7 549 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 TMEM60Q9H2L4 133 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 SLC4A7Q9Y6M7 1214 aa21.69■■□□□ 1.06
LMNA-221ENST00000506981 ZBTB42B2RXF5 422 aa21.68■■□□□ 1.06
LMNA-221ENST00000506981 HSP90AA1P07900 732 aaKnown RBP21.68■■□□□ 1.06
LMNA-221ENST00000506981 TMOD1P28289 359 aa21.68■■□□□ 1.06
LMNA-221ENST00000506981 KCNJ6P48051 423 aa21.68■■□□□ 1.06
LMNA-221ENST00000506981 SMAD3P84022 425 aaKnown RBP21.68■■□□□ 1.06
LMNA-221ENST00000506981 SPIRE1Q08AE8 756 aa21.68■■□□□ 1.06
LMNA-221ENST00000506981 TBC1D8BQ0IIM8 1120 aa21.68■■□□□ 1.06
LMNA-221ENST00000506981 MBTPS1Q14703 1052 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms