RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 LRP6O75581 1613 aa6.53□□□□□ -1.36
CLDND1-213ENST00000506927 ARAP2Q8WZ64 1704 aa6.53□□□□□ -1.36
CLDND1-213ENST00000506927 ANKRD36CQ5JPF3 1778 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 TMEM232C9JQI7 657 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 EREGO14944 169 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 NDUFB5O43674 189 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 PHACTR2O75167 634 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 SMNDC1O75940 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 NDUFA10O95299 355 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 APBA3O96018 575 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 ACPPP15309 386 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 ELNP15502 786 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 TCP1P17987 556 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 FGFR2P21802 821 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 KRT9P35527 623 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 STAT6P42226 847 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 MAGEA9P43362 315 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 TOB1P50616 345 aaPredicted RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 COPB1P53618 953 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 ZBED6P86452 979 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 CUL4BQ13620 913 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 UBE4AQ14139 1066 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 CASP8Q14790 479 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 CLUL1Q15846 466 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 IFI16Q16666 785 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 COBLL1Q53SF7 1204 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 CNNM4Q6P4Q7 775 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 ADAMTSL4Q6UY14 1074 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 FMNL3Q8IVF7 1028 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 FOXP4Q8IVH2 680 aaPredicted RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 EFCAB13Q8IY85 973 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 VGLL2Q8N8G2 317 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 AFAP1L1Q8TED9 768 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 SNX29Q8TEQ0 813 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 NELFBQ8WX92 580 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 WDR24Q96S15 920 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 NAP1L4Q99733 375 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 TACO1Q9BSH4 297 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 TRAIPQ9BWF2 469 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 PBX4Q9BYU1 374 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 CRNKL1Q9BZJ0 848 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 DEF6Q9H4E7 631 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 PIH1D3Q9NQM4 214 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 SAMSN1Q9NSI8 373 aaKnown RBP6.52□□□□□ -1.37
CLDND1-213ENST00000506927 VPS18Q9P253 973 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 JRKLQ9Y4A0 524 aa6.52□□□□□ -1.37
CLDND1-213ENST00000506927 DISP2A7MBM2 1401 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CCDC194A0A1B0GVG4 234 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 LGALS16A8MUM7 142 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 GSG1L2A8MUP6 293 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 EIF3CLB5ME19 914 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 hCG_1984214I3L0E3 225 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 EBAG9O00559 213 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 FOXP2O15409 715 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 ORC4O43929 436 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 RANBP6O60518 1105 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 PPFIA4O75335 1185 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 TRPA1O75762 1119 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 RPN1P04843 607 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 FGRP09769 529 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 SCG2P13521 617 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 SELPP16109 830 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 TRIM21P19474 475 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CYP7A1P22680 504 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 SMARCA1P28370 1054 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 GNA11P29992 359 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CASP14P31944 242 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 AFMP43652 599 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 USP14P54578 494 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 GSTO1P78417 241 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 FMR1Q06787 632 aaKnown RBP eCLIP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 RAD51AP2Q09MP3 1159 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 SEPT2Q15019 361 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 KARSQ15046 597 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 KRT31Q15323 416 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CCDC122Q5T0U0 273 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 C10orf76Q5T2E6 689 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CCDC181Q5TID7 509 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 PAPD7Q5XG87 772 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 KLHL10Q6JEL2 608 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 EMBQ6PCB8 327 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 SHISA2Q6UWI4 295 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 RPAINQ86UA6 219 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 FBXO11Q86XK2 927 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 DGKHQ86XP1 1220 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 SLC35F6Q8N357 371 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 DTWD1Q8N5C7 304 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 RNF10Q8N5U6 811 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 ZNF713Q8N859 430 aaPredicted RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 MB21D1Q8N884 522 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 EIF1ADQ8N9N8 165 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 FAM76AQ8TAV0 307 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CALML4Q96GE6 196 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 POP1Q99575 1024 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 EIF3CQ99613 913 aaKnown RBP6.51□□□□□ -1.37
CLDND1-213ENST00000506927 DNAJC7Q99615 494 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 CCSER1Q9C0I3 900 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 LACRTQ9GZZ8 138 aa6.51□□□□□ -1.37
CLDND1-213ENST00000506927 GREM2Q9H772 168 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms