RNA–Protein interactions for RNA: ENST00000506772.2

HMGN2P4-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 4, humanhuman

BASIC

Gene HMGN2P4, Length 381 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P4-201ENST00000506772 STK17AQ9UEE5 414 aa12.6□□□□□ -0.39
HMGN2P4-201ENST00000506772 WDR64B1ANS9 1081 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 POLR2DO15514 142 aaKnown RBP12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 TIMP1P01033 207 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 GH1P01241 217 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 KCNA2P16389 499 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 CDK7P50613 346 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 SEPT14Q6ZU15 432 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 SH3RF1Q7Z6J0 888 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 CEP57L1Q8IYX8 460 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 RASSF8Q8NHQ8 419 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 MYH11P35749 1972 aa12.59□□□□□ -0.39
HMGN2P4-201ENST00000506772 POTEMA6NI47 508 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 P4HBP07237 508 aaKnown RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 STAT6P42226 847 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 AMPD3Q01432 767 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 ITGB3BPQ13352 177 aaPredicted RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 RRAGBQ5VZM2 374 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 RBM43Q6ZSC3 357 aaKnown RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 CNNM3Q8NE01 707 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 SNX29Q8TEQ0 813 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 KAT6AQ92794 2004 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 HSD17B14Q9BPX1 270 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 TNMDQ9H2S6 317 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 JPH1Q9HDC5 661 aaPredicted RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 SLC9A2Q9UBY0 812 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 DDX41Q9UJV9 622 aaKnown RBP12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 ALPK3Q96L96 1907 aa12.58□□□□□ -0.4
HMGN2P4-201ENST00000506772 CCT6AP40227 531 aaKnown RBP12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 LAMC2Q13753 1193 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 E2F4Q16254 413 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 SPECC1Q5M775 1068 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 NCAPH2Q6IBW4 605 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 CCDC62Q6P9F0 684 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 USP49Q70CQ1 688 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 MIER3Q7Z3K6 550 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 RNPC3Q96LT9 517 aaKnown RBP12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 GTPBP4Q9BZE4 634 aaKnown RBP12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 UNC45AQ9H3U1 944 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 TMEM63CQ9P1W3 806 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 ARID2Q68CP9 1835 aa12.57□□□□□ -0.4
HMGN2P4-201ENST00000506772 A6NJR5 290 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 ACTN4O43707 911 aaKnown RBP12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 ATP9AO75110 1047 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 ATG7O95352 703 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 LYPLA2O95372 231 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 PSAPP07602 524 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 PURAQ00577 322 aaKnown RBP12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 PTPN11Q06124 597 aaPredicted RBP12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 SHHQ15465 462 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 DGKDQ16760 1214 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 LONRF3Q496Y0 759 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 MIS18BP1Q6P0N0 1132 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 PDXDC2PQ6P474 469 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 DHX37Q8IY37 1157 aaKnown RBP12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 RPUSD2Q8IZ73 545 aaKnown RBP12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 SLC43A3Q8NBI5 491 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 NACC1Q96RE7 527 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 EIF2AK1Q9BQI3 630 aaKnown RBP12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 KATNAL1Q9BW62 490 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 HIPK3Q9H422 1215 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 TBX21Q9UL17 535 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 DNM3Q9UQ16 869 aa12.56□□□□□ -0.4
HMGN2P4-201ENST00000506772 PP2D1A8MPX8 630 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 SLITRK3O94933 977 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 CD4P01730 458 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 SPATA31C1P0DKV0 1188 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 PLCG1P19174 1290 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 UBA1P22314 1058 aaKnown RBP12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 QARSP47897 775 aaKnown RBP12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 CHMP4BP1P59074 171 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 PSMC6P62333 389 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 GRB10Q13322 594 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 LY6KQ17RY6 165 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 CELF3Q5SZQ8 465 aaKnown RBP12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 CNNM4Q6P4Q7 775 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 NFRKBQ6P4R8 1299 aa12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 PSRC1Q6PGN9 363 aaPredicted RBP12.55□□□□□ -0.4
HMGN2P4-201ENST00000506772 CATSPER3Q86XQ3 398 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms