RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 PI4KBQ9UBF8 816 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 PCDHGC5Q9Y5F6 944 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 FOCADQ5VW36 1801 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 GOLGA8KD6RF30 607 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 PPFIA4O75335 1185 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 CASP4P49662 377 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 PPFIA1Q13136 1202 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 ALS2CLQ60I27 953 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 FRMD5Q7Z6J6 570 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 TAF4BQ92750 862 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 CAVIN3Q969G5 261 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 LENG9Q96B70 501 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 CCDC43Q96MW1 224 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZIM3Q96PE6 472 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 TSPYL1Q9H0U9 437 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 IKZF4Q9H2S9 585 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 NYAP2Q9P242 653 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZNF219Q9P2Y4 722 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 TRAF3IP3Q9Y228 551 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 PCDHB13Q9Y5F0 798 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 ADAMTSL1Q8N6G6 1762 aa8.35□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZBTB39O15060 712 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 MSH4O15457 936 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 CALUO43852 315 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 TRIM37O94972 964 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 NR3C1P04150 777 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 AP3B2Q13367 1082 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 RPS6KA1Q15418 735 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 Q4G0T1 1027 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 TTMPQ5BVD1 217 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 ALKBH5Q6P6C2 394 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 GJB7Q6PEY0 223 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 SH3BP5LQ7L8J4 393 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZC3H3Q8IXZ2 948 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 SH2D3CQ8N5H7 860 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 CRYGNQ8WXF5 182 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZDHHC15Q96MV8 337 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 MBOAT7Q96N66 472 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 SH3GL2Q99962 352 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 GDF3Q9NR23 364 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 FAM198AQ9UFP1 575 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 NAGPAQ9UK23 515 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 MYH4Q9Y623 1939 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 ARFGEF1Q9Y6D6 1849 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 PDXKO00764 312 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 CHMP2AO43633 222 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 CEP104O60308 925 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 SHOX2O60902 331 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 TBCAO75347 108 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 NDUFB10O96000 172 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 ATP1A2P50993 1020 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 GNGT1P63211 74 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 CTTNQ14247 550 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 ABCB5Q2M3G0 1257 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 CFAP58Q5T655 872 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 EPM2AIP1Q7L775 607 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 TPH2Q8IWU9 490 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 USP38Q8NB14 1042 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 CASKIN2Q8WXE0 1202 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZNF622Q969S3 477 aaKnown RBP eCLIP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 FAM20AQ96MK3 541 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 EIF2AK1Q9BQI3 630 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 AP1M1Q9BXS5 423 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 GCNT4Q9P109 453 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 RABGAP1Q9Y3P9 1069 aa8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 BZW2Q9Y6E2 419 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-204ENST00000506055 TMCO5BA8MYB1 307 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 EML1O00423 815 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 RAD51CO43502 376 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 EPB41P11171 864 aaKnown RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 NPR1P16066 1061 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 RPL13P26373 211 aaKnown RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 POLD1P28340 1107 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TNFRSF8P28908 595 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 ALDH1B1P30837 517 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 CCT5P48643 541 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 PAK2Q13177 524 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 NNTQ13423 1086 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 ZC2HC1CQ53FD0 456 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 SYDE2Q5VT97 1194 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 DPY19L2P1Q6NXN4 242 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 SAMD1Q6SPF0 538 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 MOXD1Q6UVY6 613 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 GBP6Q6ZN66 633 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 KSR1Q8IVT5 923 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 MYCT1Q8N699 235 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 BCAS4Q8TDM0 211 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 INPP4AQ96PE3 977 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 PLCB1Q9NQ66 1216 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 AJAP1Q9UKB5 411 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 ASTN1O14525 1302 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 ZNF233A6NK53 670 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TBX3O15119 743 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 GH2P01242 217 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 SREBF1P36956 1147 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 TNNC1P63316 161 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 UBXN2AP68543 259 aa8.33□□□□□ -1.08
PPARGC1A-204ENST00000506055 JAG1P78504 1218 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms