RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 NME8Q8N427 588 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 DNAJB3Q8WWF6 145 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
NR1I3-222ENST00000506018 ZNF302Q9NR11 478 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 PDRG1Q9NUG6 133 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 MTCH2Q9Y6C9 303 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 SQORQ9Y6N5 450 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 COL1A2P08123 1366 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 LCHNA4D1U4 455 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 LINC01553A4QN01 128 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 FAM86B1E9PN63 330 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 RFXAPO00287 272 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 UPP2O95045 317 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 CHRNA1P02708 482 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 FAM86B2P0C5J1 330 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 GHRP10912 638 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 XBP1P17861 261 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 ERVK-21P61565 698 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 KRT76Q01546 638 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 ITGB3BPQ13352 177 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-222ENST00000506018 NTRK3Q16288 839 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 TCTN1Q2MV58 587 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 PRR16Q569H4 304 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 ODR4Q5SWX8 454 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-222ENST00000506018 PDXDC2PQ6P474 469 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 RUFY4Q6ZNE9 571 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 TSHZ1Q6ZSZ6 1077 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 CKAP2LQ8IYA6 745 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 TOP1MTQ969P6 601 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 PCYT2Q99447 389 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 FTHL17Q9BXU8 183 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 FAM49AQ9H0Q0 323 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-222ENST00000506018 NCOA5Q9HCD5 579 aaKnown RBP11.81□□□□□ -0.52
NR1I3-222ENST00000506018 VPS54Q9P1Q0 977 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 COG5Q9UP83 839 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 CEP131Q9UPN4 1083 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 SAMM50Q9Y512 469 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 PCDHA2Q9Y5H9 948 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 CDY2AQ9Y6F7 541 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 CHD7Q9P2D1 2997 aa11.81□□□□□ -0.52
NR1I3-222ENST00000506018 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 SMIM35A0A1B0GVV1 85 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 PSAPP07602 524 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 CIITAP33076 1130 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 USP11P51784 963 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 HTRA4P83105 476 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-222ENST00000506018 MGAT3Q09327 533 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 GRB10Q13322 594 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 TOB2Q14106 344 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-222ENST00000506018 ANKRD1Q15327 319 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 PTPROQ16827 1216 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 ZNF484Q5JVG2 852 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 MARCH8Q5T0T0 291 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 ABHD15Q6UXT9 468 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 ATP8B4Q8TF62 1192 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 CRYGNQ8WXF5 182 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 ASB2Q96Q27 587 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 MTUS1Q9ULD2 1270 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 RWDD3Q9Y3V2 267 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 PCDHA10Q9Y5I2 948 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 TRPV2Q9Y5S1 764 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 TTC3P53804 2025 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 TRANK1O15050 2925 aa11.8□□□□□ -0.52
NR1I3-222ENST00000506018 IGKV6D-21A0A0A0MT36 114 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 EPOPA6NHQ4 379 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 WDR64B1ANS9 1081 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 ANAPC15P60006 121 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 LPIN1Q14693 890 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 FBXO47Q5MNV8 452 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 SWSAP1Q6NVH7 229 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-222ENST00000506018 GDPD5Q8WTR4 605 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-222ENST00000506018 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 FAM167AQ96KS9 214 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 UPF3BQ9BZI7 483 aaKnown RBP11.79□□□□□ -0.52
NR1I3-222ENST00000506018 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-222ENST00000506018 PRDM6Q9NQX0 595 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 PCDHA4Q9UN74 947 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 COL4A6Q14031 1691 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 PPFIA3O75145 1194 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 ARHGEF15O94989 841 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 CCNE2O96020 404 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 STAG3L1P0CL83 205 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 KLRC1P26715 233 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 PAK2Q13177 524 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 STK3Q13188 491 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 CCDC60Q8IWA6 550 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-222ENST00000506018 FIBCD1Q8N539 461 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 HLA-CQ95604 372 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 TEKT3Q9BXF9 490 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 CELF4Q9BZC1 486 aaKnown RBP11.79□□□□□ -0.52
NR1I3-222ENST00000506018 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
NR1I3-222ENST00000506018 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms