RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
CPNE4-206ENST00000505957 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 COL4A6Q14031 1691 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 H3BRB1 525 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 PLEKHA8P1O95397 391 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 MYCLP12524 364 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 SP2Q02086 613 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 GUCY1B3Q02153 619 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 PGM5Q15124 567 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 SAFBQ15424 915 aaKnown RBP eCLIP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 TMEM192Q8IY95 271 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 APBB2Q92870 758 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 AIFM3Q96NN9 605 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 YME1L1Q96TA2 773 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 NSUN3Q9H649 340 aaKnown RBP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 TUT1Q9H6E5 874 aaKnown RBP12.17□□□□□ -0.46
CPNE4-206ENST00000505957 VAT1LQ9HCJ6 419 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 SH3GLB2Q9NR46 395 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 MAD2L2Q9UI95 211 aa12.17□□□□□ -0.46
CPNE4-206ENST00000505957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-206ENST00000505957 H3BQ06 376 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-206ENST00000505957 ZBTB5O15062 677 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 SMIM10L2AP0DMW4 78 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 SMIM10L2BP0DMW5 78 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 GNAT1P11488 350 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 CCND2P30279 289 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 ZP2Q05996 745 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 TRAF1Q13077 416 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 PFKFB3Q16875 520 aaPredicted RBP12.16□□□□□ -0.46
CPNE4-206ENST00000505957 ZSCAN23Q3MJ62 389 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 TCEAL5Q5H9L2 206 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 CAVIN1Q6NZI2 390 aaKnown RBP12.16□□□□□ -0.46
CPNE4-206ENST00000505957 ADHFE1Q8IWW8 467 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 PHF20Q9BVI0 1012 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 RNPEPQ9H4A4 650 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 MLXIPQ9HAP2 919 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 PCDHA1Q9Y5I3 950 aa12.16□□□□□ -0.46
CPNE4-206ENST00000505957 C5orf67F2Z3F1 127 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 hCG_1984214I3L0E3 225 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 TREHO43280 583 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 PPFIA3O75145 1194 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 LETM1O95202 739 aaPredicted RBP12.15□□□□□ -0.46
CPNE4-206ENST00000505957 LGALS2P05162 132 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 RB1P06400 928 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 SCG2P13521 617 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 FOSBP53539 338 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 FAM26DQ5JW98 314 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 L1TD1Q5T7N2 865 aaKnown RBP12.15□□□□□ -0.46
CPNE4-206ENST00000505957 NOSTRINQ8IVI9 506 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 DIS3L2Q8IYB7 885 aaKnown RBP12.15□□□□□ -0.46
CPNE4-206ENST00000505957 STAG2Q8N3U4 1231 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 ZNF713Q8N859 430 aaPredicted RBP12.15□□□□□ -0.46
CPNE4-206ENST00000505957 LINC00301Q8NCQ3 95 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 LMAN2LQ9H0V9 348 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 RWDD3Q9Y3V2 267 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 MYH6P13533 1939 aa12.15□□□□□ -0.46
CPNE4-206ENST00000505957 MICAL3Q7RTP6 2002 aa12.15□□□□□ -0.47
CPNE4-206ENST00000505957 A0A1W2PQ27 194 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 A0A1W2PQ64 194 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 A0A1W2PQD8 194 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 PPP1R11O60927 126 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 STAM2O75886 525 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 UPP2O95045 317 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 ICAM3P32942 547 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 DEKP35659 375 aaKnown RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 LTBRP36941 435 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 MRE11P49959 708 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 ADAM17P78536 824 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 NEDD9Q14511 834 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 CTC1Q2NKJ3 1217 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 RILPL1Q5EBL4 403 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 GALNT17Q6IS24 598 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
CPNE4-206ENST00000505957 DDX19AQ9NUU7 478 aaKnown RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 TFIP11Q9UBB9 837 aaKnown RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-206ENST00000505957 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 SORBS3O60504 671 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms