RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 TRAF1Q13077 416 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 ZYXQ15942 572 aaKnown RBP18.62■□□□□ 0.57
LIN54-204ENST00000505397 CCDC40Q4G0X9 1142 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 USP17L6PQ6QN14 398 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 ANKRD13CQ8N6S4 541 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 VCPKMTQ9H867 229 aa18.62■□□□□ 0.57
LIN54-204ENST00000505397 PAFAH1B1P43034 410 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 EPHB4P54760 987 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 AP3B2Q13367 1082 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 NAB2Q15742 525 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 MCTP2Q6DN12 878 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 EMBQ6PCB8 327 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 SND1Q7KZF4 910 aaKnown RBP eCLIP18.61■□□□□ 0.57
LIN54-204ENST00000505397 SCFD1Q8WVM8 642 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 CAVIN3Q969G5 261 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 MBOAT7Q96N66 472 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 KCNMB3Q9NPA1 279 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 NLRC4Q9NPP4 1024 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 SMARCAL1Q9NZC9 954 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 EHD2Q9NZN4 543 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 E9PMD0 336 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 MAP3K10Q02779 954 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 CCDC181Q5TID7 509 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 GPIHBP1Q8IV16 184 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 CCDC65Q8IXS2 484 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 AIPL1Q9NZN9 384 aa18.61■□□□□ 0.57
LIN54-204ENST00000505397 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.61■□□□□ 0.57
LIN54-204ENST00000505397 CYP3A7-CYP3A51PA0A087WV96 503 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 BUB1O43683 1085 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 MARCH6O60337 910 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 PLA2G4BP0C869 781 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 CYP3A7P24462 503 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 SLC7A5Q01650 507 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 TDRD12Q587J7 1177 aaKnown RBP18.6■□□□□ 0.57
LIN54-204ENST00000505397 CHURC1Q8WUH1 139 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 PSMB7Q99436 277 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 LSM14BQ9BX40 385 aaKnown RBP18.6■□□□□ 0.57
LIN54-204ENST00000505397 ANO3Q9BYT9 981 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 RBM12Q9NTZ6 932 aaKnown RBP18.6■□□□□ 0.57
LIN54-204ENST00000505397 HACL1Q9UJ83 578 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 KIAA1024Q9UPX6 916 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 PPFIA4O75335 1185 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 CYP11B2P19099 503 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 PRELPP51888 382 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 SLC18A3Q16572 532 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 HINFPQ9BQA5 517 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 PCDHGC5Q9Y5F6 944 aa18.6■□□□□ 0.57
LIN54-204ENST00000505397 ZNF541Q9H0D2 1346 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 EPB41P11171 864 aaKnown RBP18.59■□□□□ 0.57
LIN54-204ENST00000505397 USP11P51784 963 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 POLR2FP61218 127 aaKnown RBP18.59■□□□□ 0.57
LIN54-204ENST00000505397 EDRF1Q3B7T1 1238 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 CFAP221Q4G0U5 840 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 FAM76AQ8TAV0 307 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 GANQ9H2C0 597 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.59■□□□□ 0.57
LIN54-204ENST00000505397 PITPNM2Q9BZ72 1349 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 SPDYE3A6NKU9 549 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 MATR3P43243 847 aaKnown RBP eCLIP18.59■□□□□ 0.578e-6■□□□□ 9.7
LIN54-204ENST00000505397 NNTQ13423 1086 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 KIAA1755Q5JYT7 1200 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 TEPSINQ96N21 525 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 GDF3Q9NR23 364 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 EMILIN3Q9NT22 766 aa18.59■□□□□ 0.57
LIN54-204ENST00000505397 GOLGA6CA6NDK9 693 aa18.58■□□□□ 0.57
LIN54-204ENST00000505397 GOLGA6DP0CG33 693 aa18.58■□□□□ 0.57
LIN54-204ENST00000505397 ALS2CLQ60I27 953 aa18.58■□□□□ 0.57
LIN54-204ENST00000505397 DPY19L2P1Q6NXN4 242 aa18.58■□□□□ 0.57
LIN54-204ENST00000505397 PPP4R3CPQ6ZMV5 832 aa18.58■□□□□ 0.57
LIN54-204ENST00000505397 LUC7LQ9NQ29 371 aaKnown RBP18.58■□□□□ 0.57
LIN54-204ENST00000505397 GOLGA6AQ9NYA3 693 aa18.58■□□□□ 0.57
LIN54-204ENST00000505397 TBC1D7Q9P0N9 293 aa18.58■□□□□ 0.57
LIN54-204ENST00000505397 GOLGA8KD6RF30 607 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 SLC12A3P55017 1021 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 ARSHQ5FYA8 562 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 MEI1Q5TIA1 1274 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 C8orf74Q6P047 294 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 FAM160B2Q86V87 743 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 GPBP1Q86WP2 473 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 CRYGNQ8WXF5 182 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 MS4A14Q96JA4 679 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 DEFB129Q9H1M3 183 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 DICER1Q9UPY3 1922 aaKnown RBP18.58■□□□□ 0.56
LIN54-204ENST00000505397 NPHP3-ACAD11A0A0J9YXS1 232 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 POTEB3A0JP26 581 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 GRID2IPA4D2P6 1211 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 POTECB2RU33 542 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 MEIS2O14770 477 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 TRIM66O15016 1216 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 PALMO75781 387 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 CLSTN1O94985 981 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 FOSP01100 380 aaPredicted RBP18.58■□□□□ 0.56
LIN54-204ENST00000505397 KLRC1P26715 233 aa18.58■□□□□ 0.56
LIN54-204ENST00000505397 POTEBQ6S5H4 581 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms